RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 FXYD1O00168 92 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 RGS10O43665 173 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 CHP2O43745 196 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 CD5LO43866 347 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 FMO6PO60774 539 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC22A5O76082 557 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 LY6HO94772 140 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 DBTP11182 482 aaKnown RBP7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 ATF4P18848 351 aaPredicted RBP7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 AHCYP23526 432 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 CALCRP30988 508 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 PCGF2P35227 344 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 IDH3GP51553 393 aaPredicted RBP7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 DSCR9P59020 149 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 VBP1P61758 197 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 SNRPD2P62316 118 aaKnown RBP7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 FLI1Q01543 452 aaPredicted RBP7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 SCN1BQ07699 218 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 PUDPQ08623 228 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 CAMK2DQ13557 499 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 MS4A18Q3C1V0 323 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 TIMM50Q3ZCQ8 353 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 ENTPD8Q5MY95 495 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 PXDC1Q5TGL8 231 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 LAIR2Q6ISS4 152 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF613Q6PF04 617 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC46A3Q7Z3Q1 461 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 MYPOPQ86VE0 399 aaPredicted RBP7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 HIPK1Q86Z02 1210 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 RBM45Q8IUH3 476 aaKnown RBP7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC30A8Q8IWU4 369 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 C20orf196Q8IYI0 205 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 TMEM123Q8N131 208 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 STX19Q8N4C7 294 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 GDPD1Q8N9F7 314 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 OR10H5Q8NGA6 315 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 OR4D11Q8NGI4 311 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 OR6T1Q8NGN1 323 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 OR6S1Q8NH40 331 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 FAM168AQ92567 244 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 UFD1Q92890 307 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 LRRC58Q96CX6 371 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF837Q96EG3 531 aaPredicted RBP7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC41A3Q96GZ6 507 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 SIGLEC11Q96RL6 698 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC30A2Q9BRI3 323 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 TMEM43Q9BTV4 400 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 CDADC1Q9BWV3 514 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 GABARAPL1Q9H0R8 117 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 MAGIXQ9H6Y5 334 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 ACOT13Q9NPJ3 140 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 B3GAT2Q9NPZ5 323 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 CA10Q9NS85 328 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 MED9Q9NWA0 146 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 MED29Q9NX70 200 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 CMTM6Q9NX76 183 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 ING3Q9NXR8 418 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 TBC1D24Q9ULP9 559 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 STUB1Q9UNE7 303 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 ALPK2Q86TB3 2170 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 HIVEP2P31629 2446 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 LOC102725191A0A1B0GVB3 256 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF503-AS2A6NEH8 195 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF726A6NNF4 738 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 G3V2T6 193 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 PLPP3O14495 311 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 TLX2O43763 284 aaPredicted RBP7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 AIREO43918 545 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 GPRIN2O60269 458 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 CRLF1O75462 422 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 OR6A2O95222 327 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 MT-ATP6P00846 226 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 IGKV3-15P01624 115 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 IGLV1-44P01699 117 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 CSF3P09919 207 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 ADORA3P0DMS8 318 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 CBR1P16152 277 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC25A16P16260 332 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 CD36P16671 472 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 RAB3AP20336 220 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 SERPINF1P36955 418 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 HOXA1P49639 335 aaPredicted RBP7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 GSK3BP49841 420 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 EFNA4P52798 201 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 GBX2P52951 348 aaPredicted RBP7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 NCS1P62166 190 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 RUNX1T1Q06455 604 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 TBCEQ15813 527 aaPredicted RBP7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 CARTPTQ16568 116 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 SWI5Q1ZZU3 235 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 VMACQ2NL98 169 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 MST1LQ2TV78 715 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 C3orf36Q3SXR2 165 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 CLLU1Q5K131 121 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 ARMC4Q5T2S8 1044 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 TMEM65Q6PI78 240 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 WDR88Q6ZMY6 472 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF813Q6ZN06 617 aa7.41□□□□□ -1.22
SFSWAP-202ENST00000535202 MDP1Q86V88 176 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms