RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 VPS26BQ4G0F5 336 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 UNC50Q53HI1 259 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 DCST2Q5T1A1 773 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 THEM4Q5T1C6 240 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ACSM2BQ68CK6 577 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 CLEC6AQ6EIG7 209 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM225Q6GV28 225 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 NOXRED1Q6NXP6 359 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM65Q6PI78 240 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 Q6ZTK2 550 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TRPM8Q7Z2W7 1104 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 RNF144BQ7Z419 303 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 CROCCP2Q86T23 111 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 LRRC28Q86X40 367 aaPredicted RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 SKA3Q8IX90 412 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 PDIK1LQ8N165 341 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 C4orf33Q8N1A6 199 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 PNKDQ8N490 385 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 KLHDC1Q8N7A1 406 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 C19orf18Q8NEA5 215 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 WFDC9Q8NEX5 89 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 OR5D16Q8NGK9 328 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 RHEBL1Q8TAI7 183 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 MUC7Q8TAX7 377 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 SYNPRQ8TBG9 265 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 LRRC8CQ8TDW0 803 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 GRK7Q8WTQ7 553 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 MAIP1Q8WWC4 291 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 SSMEM1Q8WWF3 244 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 RAB40AQ8WXH6 277 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ST8SIA1Q92185 356 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 CNOT9Q92600 299 aaKnown RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 DYRK2Q92630 601 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 STMN2Q93045 179 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 MCUR1Q96AQ8 359 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 SLC25A36Q96CQ1 311 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ZHX1-C8orf76Q96EF9 292 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 FAM120BQ96EK7 910 aaKnown RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TXNDC15Q96J42 360 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM237Q96Q45 408 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 SIGLEC11Q96RL6 698 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 SH3GL3Q99963 347 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ERP44Q9BS26 406 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 EMC6Q9BV81 110 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 HOXD1Q9GZZ0 328 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 IQCGQ9H095 443 aaKnown RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 PPA2Q9H2U2 334 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 DENND2DQ9H6A0 471 aaPredicted RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF385DQ9H6B1 395 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 FN3KRPQ9HA64 309 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 SAP30LQ9HAJ7 183 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 BRF2Q9HAW0 419 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 NOX4Q9NPH5 578 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 MIEF1Q9NQG6 463 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 LIN7CQ9NUP9 197 aaKnown RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 EXD2Q9NVH0 621 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 NMRK1Q9NWW6 199 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ADPRHL2Q9NX46 363 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 GRHL1Q9NZI5 618 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 RPUSD1Q9UJJ7 312 aaKnown RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF346Q9UL40 294 aaKnown RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 MKLN1Q9UL63 735 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 GRID1Q9ULK0 1009 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 SNX6Q9UNH7 406 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 HDGFL3Q9Y3E1 203 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 IGLV3-9A0A075B6K5 115 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 IGHV2-70DA0A0C4DH43 119 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 TCRBV9S1A1TA0A576 114 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 TTC36A6NLP5 189 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 CEACAM18A8MTB9 384 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 F5H0A9 414 aaPredicted RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 RPL36A-HNRNPH2H7BZ11 118 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 TM9SF1O15321 606 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 XPNPEP2O43895 674 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 EIF1BO60739 113 aaKnown RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 KLHL2O95198 593 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ANP32DO95626 131 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 BAG2O95816 211 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 HPRP00739 348 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 GSTA1P08263 222 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 KRT16P08779 473 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 TROVE2P10155 538 aaKnown RBP eCLIP2.42□□□□□ -2.021e-9■□□□□ 8.9
CHMP4A-208ENST00000534106 LAMP1P11279 417 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 LYL1P12980 280 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 B4GALT1P15291 398 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF250P15622 560 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 CBLP22681 906 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ALDH3A1P30838 453 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 LCN1P31025 176 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 GABRA5P31644 462 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 SPRP35270 261 aaPredicted RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 CCT3P49368 545 aaKnown RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 MMP15P51511 669 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 UCP2P55851 309 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 KLF3P57682 345 aaPredicted RBP2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 NCALDP61601 193 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 HOXC5Q00444 222 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF763Q0D2J5 394 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 BST1Q10588 318 aa2.42□□□□□ -2.02
CHMP4A-208ENST00000534106 LARS2Q15031 903 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms