RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SLC26A10Q8NG04 563 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 OR9Q1Q8NGQ5 310 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 MAP6Q96JE9 813 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 HCAR1Q9BXC0 346 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 NSRP1Q9H0G5 558 aaKnown RBP8.16□□□□□ -1.1
SSBP3-215ENST00000533946 MS4A5Q9H3V2 200 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 PPP1R3EQ9H7J1 279 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 MED20Q9H944 212 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 MOV10Q9HCE1 1003 aaKnown RBP8.16□□□□□ -1.1
SSBP3-215ENST00000533946 PNRC2Q9NPJ4 139 aaKnown RBP8.16□□□□□ -1.1
SSBP3-215ENST00000533946 TAS2R1Q9NYW7 299 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 PTTG3PQ9NZH4 202 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 MAGEL2Q9UJ55 1249 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 AURKCQ9UQB9 309 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 TMEM5Q9Y2B1 443 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 SOX21Q9Y651 276 aaPredicted RBP8.16□□□□□ -1.1
SSBP3-215ENST00000533946 NBEAL1Q6ZS30 2694 aa8.16□□□□□ -1.1
SSBP3-215ENST00000533946 RNF212BA8MTL3 300 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 BHLHE40O14503 412 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 XKRYO14609 159 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 ACOT8O14734 319 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 SGCEO43556 437 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 ABHD16AO95870 558 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 ADRA2CP18825 462 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 ACHEP22303 614 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 FPR3P25089 353 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 ZFP36P26651 326 aaKnown RBP8.15□□□□□ -1.1
SSBP3-215ENST00000533946 PMELP40967 661 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 CRYBB2P43320 205 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 RAD52P43351 418 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 MAGEA2P43356 314 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 CHN2P52757 468 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 RPS23P62266 143 aaKnown RBP8.15□□□□□ -1.1
SSBP3-215ENST00000533946 MBNL2Q5VZF2 373 aaKnown RBP8.15□□□□□ -1.1
SSBP3-215ENST00000533946 OR2T2Q6IF00 324 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF620Q6ZNG0 422 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 LINC01356Q8N9X3 169 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 OR52E2Q8NGJ4 325 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 OR1F12Q8NHA8 337 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 CCL17Q92583 94 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 CCDC124Q96CT7 223 aaKnown RBP8.15□□□□□ -1.1
SSBP3-215ENST00000533946 DCLRE1CQ96SD1 692 aaKnown RBP8.15□□□□□ -1.1
SSBP3-215ENST00000533946 NIPSNAP1Q9BPW8 284 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 IFT27Q9BW83 186 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 BCL2L14Q9BZR8 327 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 SHARPINQ9H0F6 387 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 ARMC1Q9NVT9 282 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 PLEK2Q9NYT0 353 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 KCNS2Q9ULS6 477 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 WIPI2Q9Y4P8 454 aa8.15□□□□□ -1.1
SSBP3-215ENST00000533946 IGHV1-69-2A0A0G2JMI3 117 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 C12orf71A8MTZ7 269 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 VSTM5A8MXK1 200 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 TNFRSF11BO00300 401 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 MLNRO43193 412 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 PLPP2O43688 288 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 ICMTO60725 284 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 HLA-DPB1P04440 258 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 IFNA8P32881 189 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 HMGA2P52926 109 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 TEKQ02763 1124 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.14□□□□□ -1.11
SSBP3-215ENST00000533946 TSPAN31Q12999 210 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 CDK5R2Q13319 367 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 KCNMB1Q16558 191 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 KRTAP27-1Q3LI81 207 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 ZNF718Q3SXZ3 478 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 ANKDD1AQ495B1 522 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 FAM205BPQ63HN1 556 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 SLC18B1Q6NT16 456 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 SPATC1Q76KD6 591 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 HDDC2Q7Z4H3 204 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 DPPA2Q7Z7J5 298 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 ADGRG5Q8IZF4 528 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 ZNF511Q8NB15 262 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 BHLHE23Q8NDY6 225 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 C19orf18Q8NEA5 215 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 OR10AD1Q8NGE0 317 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 OR1J2Q8NGS2 313 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 ZNF420Q8TAQ5 688 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-215ENST00000533946 ITLN1Q8WWA0 313 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 DVL3Q92997 716 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-215ENST00000533946 SIGLEC11Q96RL6 698 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 AMELYQ99218 206 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 KCNN2Q9H2S1 579 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 MYOZ1Q9NP98 299 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-215ENST00000533946 HIF1ANQ9NWT6 349 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 ACTR3BQ9P1U1 418 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 TMEFF2Q9UIK5 374 aaPredicted RBP8.14□□□□□ -1.11
SSBP3-215ENST00000533946 PURGQ9UJV8 347 aaKnown RBP8.14□□□□□ -1.11
SSBP3-215ENST00000533946 CDC42EP3Q9UKI2 254 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 FBXL3Q9UKT7 428 aa8.14□□□□□ -1.11
SSBP3-215ENST00000533946 LOC105371242A0A075B767 164 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 HTR3EA5X5Y0 456 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 FAM183AA6NL82 134 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 NDUFAB1O14561 156 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 TPD52L2O43399 206 aaKnown RBP8.13□□□□□ -1.11
SSBP3-215ENST00000533946 TIMM8AO60220 97 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-215ENST00000533946 DCTN3O75935 186 aa8.13□□□□□ -1.11
SSBP3-215ENST00000533946 FAM107AO95990 144 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms