RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FOXC2Q99958 501 aa10.33□□□□□ -0.76
SSBP3-214ENST00000533209 CDADC1Q9BWV3 514 aa10.33□□□□□ -0.76
SSBP3-214ENST00000533209 CXXC4Q9H2H0 198 aa10.33□□□□□ -0.76
SSBP3-214ENST00000533209 ZNF701Q9NV72 531 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-214ENST00000533209 ATPIF1Q9UII2 106 aa10.33□□□□□ -0.76
SSBP3-214ENST00000533209 GDF2Q9UK05 429 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-214ENST00000533209 NDRG4Q9ULP0 352 aaKnown RBP10.33□□□□□ -0.76
SSBP3-214ENST00000533209 DSCAMO60469 2012 aa10.33□□□□□ -0.76
SSBP3-214ENST00000533209 USF3Q68DE3 2245 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 AKAP9Q99996 3911 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 TMEM129A0AVI4 362 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 E9PQ18 207 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 ZNF593O00488 134 aaPredicted RBP10.32□□□□□ -0.76
SSBP3-214ENST00000533209 PRODHO43272 600 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 ICMTO60725 284 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 SMPD2O60906 423 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 PAX1P15863 534 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 GSTT1P30711 240 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 CDKN1AP38936 164 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 ENTPD1P49961 510 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 RAD23AP54725 363 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 UCP2P55851 309 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 ERVS71-1P61550 626 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 RPS23P62266 143 aaKnown RBP10.32□□□□□ -0.76
SSBP3-214ENST00000533209 EFNB3Q15768 340 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 RSPO1Q2MKA7 263 aaPredicted RBP10.32□□□□□ -0.76
SSBP3-214ENST00000533209 KLHL12Q53G59 568 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 TEX30Q5JUR7 227 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 ELFN2Q5R3F8 820 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 TIGD4Q8IY51 512 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 ZNF101Q8IZC7 436 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 LRRC75A-AS1Q8N1F1 130 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 TCEANCQ8N8B7 351 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 OR10S1Q8NGN2 331 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 TMEM163Q8TC26 289 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 SLC7A6Q92536 515 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 EME1Q96AY2 570 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 ZMYND19Q96E35 227 aaPredicted RBP10.32□□□□□ -0.76
SSBP3-214ENST00000533209 PRRG3Q9BZD7 231 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 GSX2Q9BZM3 304 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 HDHD2Q9H0R4 259 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 OR51B6Q9H340 312 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 PLK3Q9H4B4 646 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 CXorf56Q9H5V9 222 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 PNRC2Q9NPJ4 139 aaKnown RBP10.32□□□□□ -0.76
SSBP3-214ENST00000533209 CMAHPQ9Y471 501 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 ORC6Q9Y5N6 252 aa10.32□□□□□ -0.76
SSBP3-214ENST00000533209 CCDC182A6NF36 153 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 B9A039 149 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 TLX2O43763 284 aaPredicted RBP10.31□□□□□ -0.76
SSBP3-214ENST00000533209 NGFP01138 241 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 LCKP06239 509 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 DBHP09172 617 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 SPARCP09486 303 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 RAD52P43351 418 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 PTH2RP49190 550 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 APOFQ13790 326 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 KRTAP27-1Q3LI81 207 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 ZIK1Q3SY52 487 aaPredicted RBP10.31□□□□□ -0.76
SSBP3-214ENST00000533209 SLC35D3Q5M8T2 416 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 TMEM154Q6P9G4 183 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 BCDIN3DQ7Z5W3 292 aaKnown RBP10.31□□□□□ -0.76
SSBP3-214ENST00000533209 LRP11Q86VZ4 500 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 ERI1Q8IV48 349 aaKnown RBP10.31□□□□□ -0.76
SSBP3-214ENST00000533209 MRPL24Q96A35 216 aaKnown RBP10.31□□□□□ -0.76
SSBP3-214ENST00000533209 HRASLS5Q96KN8 279 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 C4orf45Q96LM5 186 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 IL4I1Q96RQ9 567 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 INTS14Q96SY0 518 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 MBOAT4Q96T53 435 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 PITX2Q99697 317 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 COQ7Q99807 217 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 CACNG6Q9BXT2 260 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 MRPL37Q9BZE1 423 aaKnown RBP10.31□□□□□ -0.76
SSBP3-214ENST00000533209 BCL2L14Q9BZR8 327 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 TOR3AQ9H497 397 aa10.31□□□□□ -0.76
SSBP3-214ENST00000533209 EIF3KQ9UBQ5 218 aaKnown RBP10.31□□□□□ -0.76
SSBP3-214ENST00000533209 VSTM5A8MXK1 200 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 SELENOFO60613 162 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 NDUFS7O75251 213 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 ABHD16AO95870 558 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 RPS7P62081 194 aaKnown RBP10.3□□□□□ -0.76
SSBP3-214ENST00000533209 ECH1Q13011 328 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 TRIP10Q15642 601 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 AADACL4Q5VUY2 407 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 LPCAT4Q643R3 524 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 RGS7BPQ6MZT1 257 aaPredicted RBP10.3□□□□□ -0.76
SSBP3-214ENST00000533209 RFPL4BQ6ZWI9 263 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 DPY19L4Q7Z388 723 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 DCXRQ7Z4W1 244 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 KRTAP1-3Q8IUG1 177 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 OR1J1Q8NGS3 322 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 OR6N2Q8NGY6 317 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 ABHD4Q8TB40 342 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 ST7LQ8TDW4 575 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 PERPQ96FX8 193 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 TEAD3Q99594 435 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 DOK1Q99704 481 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 ATF6BQ99941 703 aa10.3□□□□□ -0.76
SSBP3-214ENST00000533209 ELOVL3Q9HB03 270 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms