RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TCTN3Q6NUS6 607 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 LAS2Q8IYD9 372 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 ZNF417Q8TAU3 575 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 MALSU1Q96EH3 234 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 MISP3Q96FF7 219 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 CMKLR1Q99788 373 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 SELENOIQ9C0D9 397 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 MED20Q9H944 212 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 TMEM74BQ9NUR3 256 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 SH3BGRL2Q9UJC5 107 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 GAB2Q9UQC2 676 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 MRPS33Q9Y291 106 aaKnown RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 SLC35A3Q9Y2D2 325 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 LSM5Q9Y4Y9 91 aaKnown RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 COLEC10Q9Y6Z7 277 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 CHD5Q8TDI0 1954 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 FAM230AA0A1W2PPH8 454 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 C4orf47A7E2U8 309 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 SULT2B1O00204 365 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 F3P13726 295 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 MUC1P15941 1255 aaPredicted RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 SRMP19623 302 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 SNCAP37840 140 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 NUBP1P53384 320 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 ZNF345Q14585 488 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 GAB4Q2WGN9 574 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 CTSL3PQ5NE16 218 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 ATPAF1Q5TC12 328 aaPredicted RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 SLC35D2Q76EJ3 337 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 COMMD6Q7Z4G1 85 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 SLC43A2Q8N370 569 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 OR13C2Q8NGS9 318 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 OR6N1Q8NGY5 312 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 SLC38A5Q8WUX1 472 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 ZMYND19Q96E35 227 aaPredicted RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 NAA11Q9BSU3 229 aaPredicted RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 NPDC1Q9NQX5 325 aaPredicted RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 KCMF1Q9P0J7 381 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 TAAR2Q9P1P5 351 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 LRIT1Q9P2V4 623 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 LPAR3Q9UBY5 353 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 TBC1D29Q9UFV1 150 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 TMEM184BQ9Y519 407 aaPredicted RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 ZNF780BQ9Y6R6 833 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 PIEZO2Q9H5I5 2752 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 TRAV1-2A0A0B4J238 106 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 ANKRD20A5PA0PJZ0 165 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 JTBO76095 146 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 DBIP07108 87 aaKnown RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 RABIFP47224 123 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 ATP1B3P54709 279 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 STARD6P59095 220 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 STXBP1P61764 594 aaKnown RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 NUTF2P61970 127 aaKnown RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 DHODHQ02127 395 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 UBE2V2Q15819 145 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 VWA2Q5GFL6 755 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 MRM1Q6IN84 353 aaKnown RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 SLC35G3Q8N808 338 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 OR51L1Q8NGJ5 315 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 OR5AK2Q8NH90 309 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 DERL3Q96Q80 235 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 C1QTNF2Q9BXJ5 285 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 ISG20L2Q9H9L3 353 aaKnown RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 UBQLN4Q9NRR5 601 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 PNO1Q9NRX1 252 aaKnown RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 RCC2Q9P258 522 aaKnown RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 OTOGLQ3ZCN5 2332 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 TRANK1O15050 2925 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 A0A0A6YYH2 397 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 A0A1W2PPQ1 181 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 LNP1A1A4G5 178 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 A6NJ64 397 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 DUXAA6NLW8 204 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 OR6C76A6NM76 312 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 IFITM5A6NNB3 132 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 TAPBPO15533 448 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 ZNF354AO60765 605 aaPredicted RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 HOXB5P09067 269 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 METTL15P1P0C7V9 234 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 CALCBP10092 127 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 HOXA5P20719 270 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 MSR1P21757 451 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 MPLP40238 635 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 MC3RP41968 323 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 GZMMP51124 257 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 TNFRSF9Q07011 255 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 GGTA1PQ4G0N0 100 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 UBE3DQ7Z6J8 389 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 GKN2Q86XP6 184 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 RBM45Q8IUH3 476 aaKnown RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 TMEM99Q8N816 258 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 M1APQ8TC57 530 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 FRZBQ92765 325 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 RERGQ96A58 199 aaPredicted RBP6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 NDUFAF3Q9BU61 184 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 ZNF426Q9BUY5 554 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 OR52D1Q9H346 318 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 PRO3102Q9H379 93 aa6.18□□□□□ -1.42
TGFBR3-209ENST00000532540 OR14J1Q9UGF5 321 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms