RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SELENOFO60613 162 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 RAB36O95755 333 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 FADS2O95864 444 aaKnown RBP10.89□□□□□ -0.67
COPB1-208ENST00000532088 GPANK1O95872 356 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 IGHA1P01876 353 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 HLA-HP01893 362 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 SPARCP09486 303 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 RNF224P0DH78 156 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 ZNF32P17041 273 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 ALOX5APP20292 161 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 NUDT6P53370 316 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 RAB1AP62820 205 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 ECH1Q13011 328 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 RAB35Q15286 201 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 SMN1Q16637 294 aaKnown RBP10.89□□□□□ -0.67
COPB1-208ENST00000532088 MEP1BQ16820 701 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 DEGS2Q6QHC5 323 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 SLC35F2Q8IXU6 374 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 IL17RDQ8NFM7 739 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 OR51G2Q8NGK0 314 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 ST7LQ8TDW4 575 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 FAM222BQ8WU58 562 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 LGALS12Q96DT0 336 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 FOXN4Q96NZ1 517 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 COQ7Q99807 217 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 SPOCK3Q9BQ16 436 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 OR2H1Q9GZK4 316 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 RNF121Q9H920 327 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 DDX28Q9NUL7 540 aaKnown RBP10.89□□□□□ -0.67
COPB1-208ENST00000532088 AASSQ9UDR5 926 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 PSORS1C1Q9UIG5 152 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 BLOC1S6Q9UL45 172 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 LRCH1Q9Y2L9 728 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 TPRKBQ9Y3C4 175 aa10.89□□□□□ -0.67
COPB1-208ENST00000532088 ZNF503-AS2A6NEH8 195 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 ZNF670-ZNF695F2Z2N8 137 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 SGCEO43556 437 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 MRPS14O60783 128 aaKnown RBP10.88□□□□□ -0.67
COPB1-208ENST00000532088 SERPINA5P05154 406 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 LYNP07948 512 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 CD79AP11912 226 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 ZNF14P17017 642 aaPredicted RBP10.88□□□□□ -0.67
COPB1-208ENST00000532088 DCKP27707 260 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 ATP6V1E1P36543 226 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 CAPZA2P47755 286 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 PSG4Q00888 419 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 PLP2Q04941 152 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 EGR3Q06889 387 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 DBPQ10586 325 aaPredicted RBP10.88□□□□□ -0.67
COPB1-208ENST00000532088 CCDC92Q53HC0 331 aaPredicted RBP10.88□□□□□ -0.67
COPB1-208ENST00000532088 RNLSQ5VYX0 342 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 SEZ6L2Q6UXD5 910 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 B3GLCTQ6Y288 498 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 DPY19L4Q7Z388 723 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 MDP1Q86V88 176 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 ACBD7Q8N6N7 88 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 BPIFB6Q8NFQ5 453 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 OR52N5Q8NH56 324 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 FGFBP3Q8TAT2 258 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 RNF133Q8WVZ7 376 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 MRPL48Q96GC5 212 aaKnown RBP10.88□□□□□ -0.67
COPB1-208ENST00000532088 WFIKKN1Q96NZ8 548 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 DCLRE1CQ96SD1 692 aaKnown RBP10.88□□□□□ -0.67
COPB1-208ENST00000532088 MED18Q9BUE0 208 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 WNT5BQ9H1J7 359 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 UBAP1Q9NZ09 502 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 LAMP5Q9UJQ1 280 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 CACNA1CQ13936 2221 aa10.88□□□□□ -0.67
COPB1-208ENST00000532088 IQCMA0A1B0GVH7 501 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 OR6C6A6NF89 314 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 ZNF878C9JN71 531 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 F8W735 103 aaPredicted RBP10.87□□□□□ -0.67
COPB1-208ENST00000532088 RER1O15258 196 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 SYNGR3O43761 229 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 FAM20BO75063 409 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 ZNF254O75437 659 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 THBDP07204 575 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 CRYGSP22914 178 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 CRHBPP24387 322 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 DCTDP32321 178 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 NAA10P41227 235 aaPredicted RBP10.87□□□□□ -0.67
COPB1-208ENST00000532088 KIR2DL3P43628 341 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 GABARAPL2P60520 117 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 SLC35A2P78381 396 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 ROM1Q03395 351 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 EIF2B1Q14232 305 aaKnown RBP10.87□□□□□ -0.67
COPB1-208ENST00000532088 KRTAP27-1Q3LI81 207 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 PABPC1L2AQ5JQF8 200 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 ELFN2Q5R3F8 820 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 KCTD18Q6PI47 426 aaPredicted RBP10.87□□□□□ -0.67
COPB1-208ENST00000532088 DCXRQ7Z4W1 244 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 OR4F15Q8NGB8 312 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 OR52I1Q8NGK6 324 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 OR1J2Q8NGS2 313 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 HAVCR2Q8TDQ0 301 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 UBASH3BQ8TF42 649 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 HTRA1Q92743 480 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 GGHQ92820 318 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 MYDGFQ969H8 173 aa10.87□□□□□ -0.67
COPB1-208ENST00000532088 MAP6Q96JE9 813 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms