RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	TMEM18	Q96B42	140 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	MUCL1	Q96DR8	90 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	C4orf36	Q96KX1	117 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	FAM234A	Q9H0X4	552 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	OR51B5	Q9H339	312 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	EVA1A	Q9H8M9	152 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	SEBOX	Q9HB31	216 aa	Predicted RBP	4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	MOV10	Q9HCE1	1003 aa	Known RBP	4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	RAB9B	Q9NP90	201 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	MED11	Q9P086	117 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	IFNK	Q9P0W0	207 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	BCAP29	Q9UHQ4	241 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	PLLP	Q9Y342	182 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	OR10H1	Q9Y4A9	318 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	SLC25A15	Q9Y619	301 aa		4.83	□□□□□ -1.64
PUM1-222	ENST00000531867	UQCRHL	A0A096LP55	91 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	IGLV5-39	A0A0G2JS06	123 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867		A0A0J9YW62	118 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	PRSS51	A0A1B0GVH4	220 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867		A0A1W2PN81	502 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF879	B4DU55	563 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	PRSS46	E5RG02	174 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	RHOD	O00212	210 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	CHEK1	O14757	476 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	CXCL13	O43927	109 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	SH3BGRL	O75368	114 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	LYZL6	O75951	148 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	OR4F21	O95013	312 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	SYNGR4	O95473	234 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	CHRNG	P07510	517 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	PABPC4L	P0CB38	370 aa	Known RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	IRF2	P14316	349 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF44	P15621	663 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	HOXB6	P17509	224 aa	Known RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	PGC	P20142	388 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	IGHV1-2	P23083	117 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	PRDX2	P32119	198 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	ARRB2	P32121	409 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	CHRNA7	P36544	502 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	OR3A2	P47893	321 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	XK	P51811	444 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	SARNP	P82979	210 aa	Known RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	EXOSC7	Q15024	291 aa	Known RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	TGFBI	Q15582	683 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF239	Q16600	458 aa	Known RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	TTC23	Q5W5X9	447 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	TTC19	Q6DKK2	380 aa	Predicted RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	HIST2H2AA3	Q6FI13	130 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	MED27	Q6P2C8	311 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	ERAS	Q7Z444	233 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	GPR141	Q7Z602	305 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	CROCCP3	Q8IVE0	287 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	GPR137C	Q8N3F9	429 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	TCAIM	Q8N3R3	496 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	TEX29	Q8N6K0	151 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	UBL4B	Q8N7F7	174 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	BBS1	Q8NFJ9	593 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	OR4K14	Q8NGD5	310 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	OR9K2	Q8NGE7	335 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	OR52R1	Q8NGF1	315 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	OR2V1	Q8NHB1	315 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	FAM110B	Q8TC76	370 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	ABHD3	Q8WU67	409 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	CCDC107	Q8WV48	283 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	UBE2E3	Q969T4	207 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	RFT1	Q96AA3	541 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	SUCNR1	Q9BXA5	334 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	PTGES2	Q9H7Z7	377 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	WDR41	Q9HAD4	459 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	MEAF6	Q9HAF1	191 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	PNRC2	Q9NPJ4	139 aa	Known RBP	4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	SDHAF3	Q9NRP4	125 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	HIF1AN	Q9NWT6	349 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	PRODH2	Q9UF12	536 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	POU2F3	Q9UKI9	436 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	CES1P1	Q9UKY3	287 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	ABCG2	Q9UNQ0	655 aa		4.82	□□□□□ -1.64
PUM1-222	ENST00000531867	TRBV5-3	A0A0A0MS03	114 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	NPIPA5	A0A0B4J1W7	369 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867		A0A1W2PPK0	400 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	ANKRD61	A6NGH8	418 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	NPIPA7	E9PJI5	369 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	DVL1	O14640	695 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF264	O43296	627 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	SNX3	O60493	162 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	STK16	O75716	305 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	WISP3	O95389	354 aa	Predicted RBP	4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	MT-ND1	P03886	318 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	NPIPA8	P0DM63	369 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	TROVE2	P10155	538 aa	Known RBP eCLIP	4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	GGT1	P19440	569 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	PRKACB	P22694	351 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	EVI2B	P34910	448 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	APOBEC1	P41238	236 aa	Known RBP	4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	PPOX	P50336	477 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	LINC00205	P59089	165 aa		4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms