RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CDH11P55287 796 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 SNRPGP62308 76 aaKnown RBP12.5□□□□□ -0.41
CPSF1-206ENST00000531480 GGTLC2Q14390 218 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 RAB35Q15286 201 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 TBC1D28Q2M2D7 210 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 C6orf52Q5T4I8 152 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 OTPQ5XKR4 325 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 ZNF774Q6NX45 483 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 ZNF544Q6NX49 715 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 DTX2Q86UW9 622 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 PAQR4Q8N4S7 273 aaPredicted RBP12.5□□□□□ -0.41
CPSF1-206ENST00000531480 TCEANCQ8N8B7 351 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 OR10H5Q8NGA6 315 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 OR1J2Q8NGS2 313 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 NINJ1Q92982 152 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 TEAD3Q99594 435 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 DHRS9Q9BPW9 319 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 HDHD2Q9H0R4 259 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 LIME1Q9H400 295 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 ZNF442Q9H7R0 627 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 HAO2Q9NYQ3 351 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 CISD1Q9NZ45 108 aaKnown RBP12.5□□□□□ -0.41
CPSF1-206ENST00000531480 ST6GALNAC2Q9UJ37 374 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 GDF2Q9UK05 429 aaPredicted RBP12.5□□□□□ -0.41
CPSF1-206ENST00000531480 MAGEA13PA6NCF6 341 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 TVP23AA6NH52 213 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 M0R129 80 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 ZNF593O00488 134 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-206ENST00000531480 DOK2O60496 412 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 ATE1O95260 518 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 TNFAIP8O95379 198 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 HLA-DQA2P01906 255 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 ZNF823P16415 610 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 GABRB1P18505 474 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 CD53P19397 219 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 GSTT1P30711 240 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 ADAM8P78325 824 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 ADARB1P78563 741 aaKnown RBP12.49□□□□□ -0.41
CPSF1-206ENST00000531480 RSPO1Q2MKA7 263 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-206ENST00000531480 ZIK1Q3SY52 487 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-206ENST00000531480 ELFN2Q5R3F8 820 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 CFAP77Q6ZQR2 320 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 RHOUQ7L0Q8 258 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 OR10S1Q8NGN2 331 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 OR6K6Q8NGW6 343 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 ST7LQ8TDW4 575 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 TMEM171Q8WVE6 324 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 NRGNQ92686 78 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 MAP6Q96JE9 813 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 CNBD2Q96M20 576 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 COQ7Q99807 217 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 KCNS3Q9BQ31 491 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 OR51V1Q9H2C8 321 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 CA10Q9NS85 328 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 DDX28Q9NUL7 540 aaKnown RBP12.49□□□□□ -0.41
CPSF1-206ENST00000531480 SCN3BQ9NY72 215 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 PLEK2Q9NYT0 353 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 ITGB1BP2Q9UKP3 347 aa12.49□□□□□ -0.41
CPSF1-206ENST00000531480 ARFGEF3Q5TH69 2177 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 CD8AP01732 235 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 RAF1P04049 648 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 PAX1P15863 534 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 OTX1P32242 354 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-206ENST00000531480 TTKP33981 857 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 APLNRP35414 380 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 GLRXP35754 106 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 WNT5AP41221 380 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 CHN2P52757 468 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 ECH1Q13011 328 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 TMED1Q13445 227 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 APOFQ13790 326 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 C11orf71Q6IPW1 123 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 CORO6Q6QEF8 472 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 MEPCEQ7L2J0 689 aaKnown RBP12.48□□□□□ -0.41
CPSF1-206ENST00000531480 GID4Q8IVV7 300 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 C1orf174Q8IYL3 243 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 OR1F12Q8NHA8 337 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 SMAP2Q8WU79 429 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-206ENST00000531480 IPCEF1Q8WWN9 437 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-206ENST00000531480 MBD6Q96DN6 1003 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 ZMYND19Q96E35 227 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-206ENST00000531480 IL4I1Q96RQ9 567 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 INTS14Q96SY0 518 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 UBTD1Q9HAC8 227 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 MYRFQ9Y2G1 1151 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 POLR1DQ9Y2S0 133 aa12.48□□□□□ -0.41
CPSF1-206ENST00000531480 SLC22A31A6NKX4 558 aa12.47□□□□□ -0.41
CPSF1-206ENST00000531480 J3QW42 95 aa12.47□□□□□ -0.41
CPSF1-206ENST00000531480 OVOL3O00110 214 aa12.47□□□□□ -0.41
CPSF1-206ENST00000531480 SOD3P08294 240 aa12.47□□□□□ -0.41
CPSF1-206ENST00000531480 CCL2P13500 99 aa12.47□□□□□ -0.41
CPSF1-206ENST00000531480 APOBEC3AP31941 199 aaPredicted RBP12.47□□□□□ -0.41
CPSF1-206ENST00000531480 RPS27P42677 84 aaKnown RBP12.47□□□□□ -0.41
CPSF1-206ENST00000531480 GDI2P50395 445 aaKnown RBP12.47□□□□□ -0.41
CPSF1-206ENST00000531480 UCP2P55851 309 aa12.47□□□□□ -0.41
CPSF1-206ENST00000531480 CXCR4P61073 352 aa12.47□□□□□ -0.41
CPSF1-206ENST00000531480 IL5RAQ01344 420 aa12.47□□□□□ -0.41
CPSF1-206ENST00000531480 EFNB3Q15768 340 aa12.47□□□□□ -0.41
CPSF1-206ENST00000531480 ADIPOQQ15848 244 aa12.47□□□□□ -0.41
CPSF1-206ENST00000531480 OCLNQ16625 522 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms