RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 HTR3EA5X5Y0 456 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 CEACAM18A8MTB9 384 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 TMEM178BH3BS89 294 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 CDC42EP2O14613 210 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 CTLA4P16410 223 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 ZNF26P17031 533 aaPredicted RBP15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 CD80P33681 288 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 RPL4P36578 427 aaKnown RBP15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 MDH2P40926 338 aaKnown RBP15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 MMP16P51512 607 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 KLF10Q13118 480 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 HLXQ14774 488 aaPredicted RBP15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 TRAM2Q15035 370 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 COQ5Q5HYK3 327 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 TBPL2Q6SJ96 375 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 OR2T12Q8NG77 320 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 OR10AD1Q8NGE0 317 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 ZNF420Q8TAQ5 688 aaPredicted RBP15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 HAVCR1Q96D42 359 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 FNDC11Q9BVV2 318 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 MS4A7Q9GZW8 240 aaPredicted RBP15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 ZMAT3Q9HA38 289 aaKnown RBP15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 GCM1Q9NP62 436 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 GRHPRQ9UBQ7 328 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 OR5V1Q9UGF6 321 aa15.46■□□□□ 0.07
SSSCA1-206ENST00000531405 IGHV3-64DA0A0J9YX35 117 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 LOC100653049A0A140TA62 436 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 HMGB1P1B2RPK0 211 aaPredicted RBP15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 IMPA2O14732 288 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 KRT34O76011 436 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 NPPAP01160 153 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 RNASE1P07998 156 aaKnown RBP15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 DBHP09172 617 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 IFNA8P32881 189 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 SLC9A3P48764 834 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 GUCY1A3Q02108 690 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 PAX8Q06710 450 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 SLC9A3R2Q15599 337 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 PARP8Q8N3A8 854 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 OR52E2Q8NGJ4 325 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 RERGLQ9H628 205 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 PTTG3PQ9NZH4 202 aa15.45■□□□□ 0.06
SSSCA1-206ENST00000531405 NOTCH1P46531 2555 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 A0A087WUU8 490 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 TEX13CA0A0J9YWL9 993 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 MDFIC2A0A1B0GVS7 189 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 ELOVL7A1L3X0 281 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 PRSS37A4D1T9 235 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 BBIP1A8MTZ0 92 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 SURF4O15260 269 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 GPANK1O95872 356 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 CYB5R3P00387 301 aaPredicted RBP15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 IFNW1P05000 195 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 CD14P08571 375 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 WNT2P09544 360 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 TUBG1P23258 451 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 PAX2Q02962 417 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 AQP6Q13520 282 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 ANKDD1AQ495B1 522 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 ZNF730Q6ZMV8 503 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 FAM122BQ7Z309 247 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 MUC20Q8N307 709 aaPredicted RBP15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 ATG16L2Q8NAA4 619 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 ACOT11Q8WXI4 607 aaPredicted RBP15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 PTP4A1Q93096 173 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 SLC25A28Q96A46 364 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 RASD2Q96D21 266 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 ZNF570Q96NI8 536 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 WACQ9BTA9 647 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 SSBP3Q9BWW4 388 aaPredicted RBP15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 TUBG2Q9NRH3 451 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 ASH2LQ9UBL3 628 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 LRCH1Q9Y2L9 728 aa15.44■□□□□ 0.06
SSSCA1-206ENST00000531405 OR6C6A6NF89 314 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 H0YL77 283 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 XKRYO14609 159 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 RPS2P15880 293 aaKnown RBP15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 ZBED5Q49AG3 693 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 CCDC92Q53HC0 331 aaPredicted RBP15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 OR2T2Q6IF00 324 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 LEG1Q6P5S2 330 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 TREML4Q6UXN2 200 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 MBOAT2Q6ZWT7 520 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 OR1F12Q8NHA8 337 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 LZICQ8WZA0 190 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 MEGF10Q96KG7 1140 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 SAR1AQ9NR31 198 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 GID8Q9NWU2 228 aa15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 COA3Q9Y2R0 106 aaPredicted RBP15.43■□□□□ 0.06
SSSCA1-206ENST00000531405 WNK1Q9H4A3 2382 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 TRAV40A0A0B4J280 105 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 RER1O15258 196 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 SLC16A7O60669 478 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 ZNF682O95780 498 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 RAC2P15153 192 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 MDKP21741 143 aaPredicted RBP15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 IL13RA1P78552 427 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 KRR1Q13601 381 aaKnown RBP15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 KLBQ86Z14 1044 aa15.42■□□□□ 0.06
SSSCA1-206ENST00000531405 RNF113BQ8IZP6 322 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms