RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 PNMA8CA0A1B0GUJ8 204 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 IQCMA0A1B0GVH7 501 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OR5H1A6NKK0 313 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF878C9JN71 531 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 E9PI62 339 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 F5H5K5 113 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 C16orf97H3BN30 126 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 DOK2O60496 412 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF254O75437 659 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 AGFG2O95081 481 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 WNT11O96014 354 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TFAP2AP05549 437 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 MMP7P09237 267 aaPredicted RBP7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 JUNBP17275 347 aaPredicted RBP7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OPRL1P41146 370 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 HTR5AP47898 357 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ASCL1P50553 236 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PRKXP51817 358 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 GTF2A1P52655 376 aaPredicted RBP7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 HIST1H3AP68431 136 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 GALK2Q01415 458 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ROM1Q03395 351 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ECH1Q13011 328 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 RAB35Q15286 201 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TSTQ16762 297 aaKnown RBP7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF684Q5T5D7 378 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 HIST2H3PS2Q5TEC6 136 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 LIPNQ5VXI9 398 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF544Q6NX49 715 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 DEGS2Q6QHC5 323 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 HIST2H3AQ71DI3 136 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 VASH1Q7L8A9 365 aaPredicted RBP7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 MDP1Q86V88 176 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 EGFL6Q8IUX8 553 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF283Q8N7M2 679 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZFP41Q8N8Y5 198 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 WDR31Q8NA23 367 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OR10S1Q8NGN2 331 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 MUL1Q969V5 352 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SPTSSAQ969W0 71 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TMIGD2Q96BF3 282 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 S100PBPQ96BU1 408 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 MUCL1Q96DR8 90 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PELI1Q96FA3 418 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 C1QTNF6Q9BXI9 259 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ACTR6Q9GZN1 396 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 HDHD2Q9H0R4 259 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 WNT5BQ9H1J7 359 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 BRD7Q9NPI1 651 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 KCNJ16Q9NPI9 418 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TRIM36Q9NQ86 728 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ACOXLQ9NUZ1 547 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 B3GNT2Q9NY97 397 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF224Q9NZL3 707 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 GTF2A1LQ9UNN4 478 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 LSM2Q9Y333 95 aaKnown RBP7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 LRP12Q9Y561 859 aa7.43□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CACNA1GO43497 2377 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF407Q9C0G0 2248 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 LOC400499M0QZD8 3231 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ARPC4-TTLL3A0A0A6YYG9 625 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 NKX2-6A6NCS4 301 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF503-AS2A6NEH8 195 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CBR1P16152 277 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PSMB1P20618 241 aaKnown RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CCNOP22674 350 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 APEX1P27695 318 aaKnown RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 APLNRP35414 380 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 UGT2B10P36537 528 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ALDH3B2P48448 385 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 GDI2P50395 445 aaKnown RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TPTEP56180 551 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 TAS2R43P59537 309 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 GRB2P62993 217 aaKnown RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 MLLT11Q13015 90 aaPredicted RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 MRPL28Q13084 256 aaKnown RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 BLMHQ13867 455 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 RAB39AQ14964 217 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF829Q3KNS6 432 aaPredicted RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 SYT6Q5T7P8 510 aaPredicted RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 RPL22L1Q6P5R6 122 aaKnown RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 GPR141Q7Z602 305 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 P2RY8Q86VZ1 359 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 C17orf78Q8N4C9 275 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ZNF485Q8NCK3 441 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 CPEB3Q8NE35 698 aaKnown RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 UFD1Q92890 307 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 KCNJ15Q99712 375 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 COQ7Q99807 217 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ATF6BQ99941 703 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 USB1Q9BQ65 265 aaKnown RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 NIPAL2Q9H841 368 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 NOX3Q9HBY0 568 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 ISYNA1Q9NPH2 558 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 OBP2BQ9NPH6 170 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 PNRC2Q9NPJ4 139 aaKnown RBP7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 FBXL3Q9UKT7 428 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 AMDHD2Q9Y303 409 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 GRIP1Q9Y3R0 1128 aa7.42□□□□□ -1.22
NEDD8-MDP1-201ENST00000530579 KIAA1549Q9HCM3 1950 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms