RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CADP27708 2225 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 UNC79Q9P2D8 2635 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 A0A087WXM4 84 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 TRIM64A6NGJ6 449 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 H3BSH0 61 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 SGCEO43556 437 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 TMCC2O75069 709 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 INMTO95050 263 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 LALBAP00709 142 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 CELA3BP08861 270 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 DBHP09172 617 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 CCL2P13500 99 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 PLA2G2AP14555 144 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 PSMB9P28065 219 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 HOXC12P31275 282 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 GTF2A1P52655 376 aaPredicted RBP9.3□□□□□ -0.92
SOX6-213ENST00000530378 UBE2NP61088 152 aaKnown RBP9.3□□□□□ -0.92
SOX6-213ENST00000530378 LSM6P62312 80 aaKnown RBP9.3□□□□□ -0.92
SOX6-213ENST00000530378 PSG4Q00888 419 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 GALK2Q01415 458 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 IRF3Q14653 427 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 P2RY6Q15077 328 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 CCDC92Q53HC0 331 aaPredicted RBP9.3□□□□□ -0.92
SOX6-213ENST00000530378 PABPC1L2AQ5JQF8 200 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 MYPOPQ86VE0 399 aaPredicted RBP9.3□□□□□ -0.92
SOX6-213ENST00000530378 KLBQ86Z14 1044 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 KLHL36Q8N4N3 616 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 HSD17B8Q92506 261 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 MND1Q9BWT6 205 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 OR2H1Q9GZK4 316 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 ACTR6Q9GZN1 396 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 WNT5BQ9H1J7 359 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 KCNN2Q9H2S1 579 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 C1orf198Q9H425 327 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 ELOVL3Q9HB03 270 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 ACOT13Q9NPJ3 140 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 LRP12Q9Y561 859 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 PCDHGB1Q9Y5G3 927 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 DOPEY1Q5JWR5 2465 aa9.3□□□□□ -0.92
SOX6-213ENST00000530378 E9PI62 339 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 CNOT4O95628 575 aaKnown RBP9.29□□□□□ -0.92
SOX6-213ENST00000530378 KRT8P05787 483 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 MMP7P09237 267 aaPredicted RBP9.29□□□□□ -0.92
SOX6-213ENST00000530378 SLC2A1P11166 492 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 PCMT1P22061 227 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 CCNOP22674 350 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 ANOS1P23352 680 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 APEX1P27695 318 aaKnown RBP9.29□□□□□ -0.92
SOX6-213ENST00000530378 HTR5AP47898 357 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 IDH3GP51553 393 aaPredicted RBP9.29□□□□□ -0.92
SOX6-213ENST00000530378 PRKXP51817 358 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 RAB1AP62820 205 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 GALEQ14376 348 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 RAB39AQ14964 217 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 TAF13Q15543 124 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 PCK2Q16822 640 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 ODF4Q2M2E3 257 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 SLC36A2Q495M3 483 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 TEX30Q5JUR7 227 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 C22orf34Q6ZV56 151 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 VASH1Q7L8A9 365 aaPredicted RBP9.29□□□□□ -0.92
SOX6-213ENST00000530378 FAM220AQ7Z4H9 259 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 SVOPQ8N4V2 548 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 NANOGP1Q8N7R0 232 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 ZNF454Q8N9F8 522 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 CDCA4Q9BXL8 241 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 MRPS26Q9BYN8 205 aaKnown RBP9.29□□□□□ -0.92
SOX6-213ENST00000530378 PNRC2Q9NPJ4 139 aaKnown RBP9.29□□□□□ -0.92
SOX6-213ENST00000530378 JKAMPQ9P055 326 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 SCOCQ9UIL1 159 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 LSM2Q9Y333 95 aaKnown RBP9.29□□□□□ -0.92
SOX6-213ENST00000530378 TMEM14AQ9Y6G1 99 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 HCFC1P51610 2035 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 TENM4Q6N022 2769 aa9.29□□□□□ -0.92
SOX6-213ENST00000530378 CLPTM1O96005 669 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 H2BFMP0C1H6 154 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 RNF224P0DH78 156 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 UGT2B10P36537 528 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 ASCL1P50553 236 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 WNT4P56705 351 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 MFGE8Q08431 387 aaPredicted RBP9.28□□□□□ -0.92
SOX6-213ENST00000530378 SCRN3Q0VDG4 424 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 TBCEQ15813 527 aaPredicted RBP9.28□□□□□ -0.92
SOX6-213ENST00000530378 GSG1Q2KHT4 349 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 CDONQ4KMG0 1287 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 ZNF627Q7L945 461 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 WDR31Q8NA23 367 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 CPEB3Q8NE35 698 aaKnown RBP9.28□□□□□ -0.92
SOX6-213ENST00000530378 GJC3Q8NFK1 279 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 RNF133Q8WVZ7 376 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 OR8B4Q96RC9 309 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 MROQ9BYG7 248 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 OR51B6Q9H340 312 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 SLC17A5Q9NRA2 495 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 INPP5EQ9NRR6 644 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 TIMM10BQ9Y5J6 103 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 TMEM129A0AVI4 362 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 ZNF878C9JN71 531 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 F5H5K5 113 aa9.28□□□□□ -0.92
SOX6-213ENST00000530378 UBL3O95164 117 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms