RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 FABP3P05413 133 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 CD14P08571 375 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 ATP6V1B2P21281 511 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 USF1P22415 310 aaPredicted RBP7.25□□□□□ -1.25
SSBP3-212ENST00000528930 CDAP32320 146 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF84P51523 738 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 ERVK-25P63136 954 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 MS4A2Q01362 244 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 CD47Q08722 323 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 SNTB2Q13425 540 aaKnown RBP7.25□□□□□ -1.25
SSBP3-212ENST00000528930 DAG1Q14118 895 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 RAB35Q15286 201 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 FGD3Q5JSP0 725 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 THEM4Q5T1C6 240 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 FAM27BQ5VT28 67 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 KRT80Q6KB66 452 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 UGT2A3Q6UWM9 527 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 IZUMO2Q6UXV1 221 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 CYP2R1Q6VVX0 501 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 Q6ZNX1 250 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 FOXL2NBQ6ZUU3 175 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 SLC16A14Q7RTX9 510 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 DPPA2Q7Z7J5 298 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 ERI1Q8IV48 349 aaKnown RBP7.25□□□□□ -1.25
SSBP3-212ENST00000528930 NSMAFQ92636 917 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 Q96M85 177 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 SORCS2Q96PQ0 1159 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 RBP7Q96R05 134 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 GPX7Q96SL4 187 aaPredicted RBP7.25□□□□□ -1.25
SSBP3-212ENST00000528930 SIAEQ9HAT2 523 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 IL1RAPQ9NPH3 570 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 NRIP3Q9NQ35 241 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 UBAP1Q9NZ09 502 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 ACTR3BQ9P1U1 418 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 FBXL3Q9UKT7 428 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 TMEM5Q9Y2B1 443 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 ADAM18Q9Y3Q7 739 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 PMF1-BGLAPU3KQ54 211 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 COL7A1Q02388 2944 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 A0A1B0GVG6 124 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 SLC22A23A1A5C7 686 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 H7C1C5 153 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 IMPA2O14732 288 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 LY6HO94772 140 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 NDUFB2O95178 105 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 GADD45GO95257 159 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 SCG5P05408 212 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 NR2C1P13056 603 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF32P17041 273 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 NPR2P20594 1047 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 RRM2P31350 389 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 GLRXP35754 106 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 RPL4P36578 427 aaKnown RBP7.24□□□□□ -1.25
SSBP3-212ENST00000528930 SRP14P37108 136 aaKnown RBP7.24□□□□□ -1.25
SSBP3-212ENST00000528930 MAGEA2P43356 314 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 PPOXP50336 477 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 EFNA4P52798 201 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 HMGA2P52926 109 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 NUDT6P53370 316 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 SNRPD2P62316 118 aaKnown RBP7.24□□□□□ -1.25
SSBP3-212ENST00000528930 LCN6P62502 163 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 FOXL1Q12952 345 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 TRIM25Q14258 630 aaKnown RBP7.24□□□□□ -1.25
SSBP3-212ENST00000528930 SGCAQ16586 387 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 SLC36A2Q495M3 483 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 MESTQ5EB52 335 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 OGFRL1Q5TC84 451 aaPredicted RBP7.24□□□□□ -1.25
SSBP3-212ENST00000528930 FAM205BPQ63HN1 556 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 LCN8Q6JVE9 175 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 ZFP1Q6P2D0 407 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 TMEM53Q6P2H8 277 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 USP43Q70EL4 1123 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 SVOPLQ8N434 492 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 LRRC18Q8N456 261 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 PAQR4Q8N4S7 273 aaPredicted RBP7.24□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF525Q8N782 197 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 CPEB3Q8NE35 698 aaKnown RBP7.24□□□□□ -1.25
SSBP3-212ENST00000528930 FNDC8Q8TC99 324 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 MRPL37Q9BZE1 423 aaKnown RBP7.24□□□□□ -1.25
SSBP3-212ENST00000528930 RBM38Q9H0Z9 239 aaKnown RBP7.24□□□□□ -1.25
SSBP3-212ENST00000528930 RNF121Q9H920 327 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 PLGRKTQ9HBL7 147 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 PALMDQ9NP74 551 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 IL20RAQ9UHF4 553 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 AURKCQ9UQB9 309 aa7.24□□□□□ -1.25
SSBP3-212ENST00000528930 HERC2O95714 4834 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 TEX13CA0A0J9YWL9 993 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 PRSS37A4D1T9 235 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 UNC119BA6NIH7 251 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 A6NIZ1 184 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 VSTM5A8MXK1 200 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 TNFAIP8O95379 198 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 SNAP29O95721 258 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 TXNDC12O95881 172 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 TFAP2AP05549 437 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 CST2P09228 141 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 CCL2P13500 99 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF12P17014 697 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 LAP3P28838 519 aa7.23□□□□□ -1.25
SSBP3-212ENST00000528930 SDHAP31040 664 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms