RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 NCF1CA8MVU1 366 aaPredicted RBP1.9□□□□□ -2.11
COPB1-203ENST00000525214 WRBO00258 174 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 TIMM8AO60220 97 aaPredicted RBP1.9□□□□□ -2.11
COPB1-203ENST00000525214 CLDN9O95484 217 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 GZMAP12544 262 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 ANXA8P13928 327 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 DTYMKP23919 212 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 HSD17B2P37059 387 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 MAGEA8P43361 318 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 SYKP43405 635 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 GDI2P50395 445 aaKnown RBP1.9□□□□□ -2.11
COPB1-203ENST00000525214 SEC61GP60059 68 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 BST1Q10588 318 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 IFT88Q13099 833 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 IL18Q14116 193 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 WDR43Q15061 677 aaKnown RBP eCLIP1.9□□□□□ -2.11
COPB1-203ENST00000525214 CAVIN4Q5BKX8 364 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 ANXA8L1Q5VT79 327 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 ANKRD22Q5VYY1 191 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 UQCC3Q6UW78 93 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 BZW1Q7L1Q6 419 aaKnown RBP1.9□□□□□ -2.11
COPB1-203ENST00000525214 CENPQQ7L2Z9 268 aaPredicted RBP1.9□□□□□ -2.11
COPB1-203ENST00000525214 OTUD6AQ7L8S5 288 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 PRSS58Q8IYP2 241 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 TMEM105Q8N8V8 129 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 TSEN15Q8WW01 171 aaKnown RBP1.9□□□□□ -2.11
COPB1-203ENST00000525214 ZNF75CPQ92670 426 aaPredicted RBP1.9□□□□□ -2.11
COPB1-203ENST00000525214 ZNF488Q96MN9 340 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 COPS8Q99627 209 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 NUP58Q9BVL2 599 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 ROPN1BQ9BZX4 212 aaPredicted RBP1.9□□□□□ -2.11
COPB1-203ENST00000525214 OR52D1Q9H346 318 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 FANCEQ9HB96 536 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 NEK6Q9HC98 313 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 ADAM28Q9UKQ2 775 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 TTC41PQ6P2S7 1318 aa1.9□□□□□ -2.11
COPB1-203ENST00000525214 PLEKHG2Q9H7P9 1386 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 GOLGA6L7A0A1B0GV03 622 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 C9JVG2 144 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 H0YJW9 148 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 AIFM1O95831 613 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 C2P06681 752 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 CRYGBP07316 175 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 MCF2P10911 925 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 TNNI1P19237 187 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 CD1CP29017 333 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 CCT6AP40227 531 aaKnown RBP1.89□□□□□ -2.11
COPB1-203ENST00000525214 FBXW4P57775 412 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 C1orf185Q5T7R7 199 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 AP1ARQ63HQ0 302 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 SLC16A13Q7RTY0 426 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 H2BFWTQ7Z2G1 175 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 EGFL6Q8IUX8 553 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 CDKL3Q8IVW4 592 aaPredicted RBP1.89□□□□□ -2.11
COPB1-203ENST00000525214 ZNF664Q8N3J9 261 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 COMMD1Q8N668 190 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 OTUD6BQ8N6M0 293 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 TMEM104Q8NE00 496 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 CCDC148Q8NFR7 591 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 OR52K1Q8NGK4 314 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 OR9A2Q8NGT5 310 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 OR6N1Q8NGY5 312 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 KCNG3Q8TAE7 436 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 SCFD1Q8WVM8 642 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 C10orf35Q96D05 121 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 IFT74Q96LB3 600 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 TCEANC2Q96MN5 208 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 DHX35Q9H5Z1 703 aaKnown RBP1.89□□□□□ -2.11
COPB1-203ENST00000525214 NMRAL1Q9HBL8 299 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 ZNF639Q9UID6 485 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 IKZF2Q9UKS7 526 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 CHTOPQ9Y3Y2 248 aaKnown RBP1.89□□□□□ -2.11
COPB1-203ENST00000525214 MROH5Q6ZUA9 1318 aa1.89□□□□□ -2.11
COPB1-203ENST00000525214 IGHV1OR15-9A0A0B4J2B8 117 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 A0A1B0GVL5 298 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 SERTM2A0A1B0GWG4 89 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 SMCO3A2RU48 225 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 ZNF98A6NK75 572 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 DNALI1O14645 258 aaPredicted RBP1.88□□□□□ -2.11
COPB1-203ENST00000525214 CDH16O75309 829 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 CTAG2O75638 210 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 STAG3L3P0CL85 134 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 CALM1P0DP23 149 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 CALM2P0DP24 149 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 CALM3P0DP25 149 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 RALBP11234 206 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 OTX1P32242 354 aaPredicted RBP1.88□□□□□ -2.11
COPB1-203ENST00000525214 CRYBB2P43320 205 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 TNNT2P45379 298 aaPredicted RBP1.88□□□□□ -2.11
COPB1-203ENST00000525214 BST2Q10589 180 aaKnown RBP1.88□□□□□ -2.11
COPB1-203ENST00000525214 XKR7Q5GH72 579 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 LRRC66Q68CR7 880 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 TMEM107Q6UX40 140 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 TMCO2Q7Z6W1 182 aaPredicted RBP1.88□□□□□ -2.11
COPB1-203ENST00000525214 PSTKQ8IV42 348 aaKnown RBP1.88□□□□□ -2.11
COPB1-203ENST00000525214 WDFY1Q8IWB7 410 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 SPANXA2-OT1Q8N9U9 137 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 OR10R2Q8NGX6 335 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 OR10J6PQ8NGY7 276 aa1.88□□□□□ -2.11
COPB1-203ENST00000525214 FAM81AQ8TBF8 368 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms