RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 PIPOXQ9P0Z9 390 aa4.46□□□□□ -1.7
PABPC1-223ENST00000523636 ABCD2Q9UBJ2 740 aa4.46□□□□□ -1.7
PABPC1-223ENST00000523636 MARCOQ9UEW3 520 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-223ENST00000523636 CD84Q9UIB8 345 aa4.46□□□□□ -1.7
PABPC1-223ENST00000523636 PHF11Q9UIL8 331 aa4.46□□□□□ -1.7
PABPC1-223ENST00000523636 C3orf18Q9UK00 162 aa4.46□□□□□ -1.7
PABPC1-223ENST00000523636 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.46□□□□□ -1.7
PABPC1-223ENST00000523636 LSM4Q9Y4Z0 139 aaKnown RBP4.46□□□□□ -1.7
PABPC1-223ENST00000523636 KLK4Q9Y5K2 254 aa4.46□□□□□ -1.7
PABPC1-223ENST00000523636 WIF1Q9Y5W5 379 aa4.46□□□□□ -1.7
PABPC1-223ENST00000523636 NPTNQ9Y639 398 aa4.46□□□□□ -1.7
PABPC1-223ENST00000523636 CEPT1Q9Y6K0 416 aa4.46□□□□□ -1.7
PABPC1-223ENST00000523636 ZCWPW2A0A1B0GU75 182 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 VSTM2BA6NLU5 285 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 MCIDASD6RGH6 385 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 SGK494L7N484 410 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 OVOL3O00110 214 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 KCNK1O00180 336 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 DFFAO00273 331 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 PFDN6O15212 129 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 OR10H2O60403 315 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 CDC40O60508 579 aaKnown RBP eCLIP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 PSIP1O75475 530 aaKnown RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 OXSR1O95747 527 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 IGSF6O95976 241 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 SERPIND1P05546 499 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 CSN3P07498 182 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 COX5BP10606 129 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 COX4I1P13073 169 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 BMP5P22003 454 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 ME2P23368 584 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 ID1P41134 155 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 CDX1P47902 265 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 TGM4P49221 684 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 TMED10P49755 219 aaKnown RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 ELLP55199 621 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 DNAJB13P59910 316 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 RAB10P61026 200 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 CXCR4P61073 352 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 CHRNB3Q05901 458 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 RIPPLY1Q0D2K3 151 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 SNTA1Q13424 505 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 MED21Q13503 144 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 FASTKQ14296 549 aaKnown RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 OR1C1Q15619 314 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 VAMP3Q15836 100 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 ZIC1Q15915 447 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 RBBP7Q16576 425 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 DEFB110Q30KQ9 67 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 GPR107Q5VW38 600 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 ADNP2Q6IQ32 1131 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 PRR27Q6MZM9 219 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 RWDD4Q6NW29 188 aaKnown RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 RFPL4BQ6ZWI9 263 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 MEPCEQ7L2J0 689 aaKnown RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 SLC29A4Q7RTT9 530 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 PIWIL4Q7Z3Z4 852 aaKnown RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 NOXA1Q86UR1 476 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 SERPINA9Q86WD7 417 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 ADGRG3Q86Y34 549 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 ADGRF3Q8IZF5 1079 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 PARP8Q8N3A8 854 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 ATPAF2Q8N5M1 289 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 GIPC3Q8TF64 312 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 GLYATL1Q969I3 302 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 C3orf30Q96M34 536 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 SFXN2Q96NB2 322 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 SMIM14Q96QK8 99 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 TNFRSF13CQ96RJ3 184 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 GPR22Q99680 433 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 ECSITQ9BQ95 431 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 MRPL57Q9BQC6 102 aaKnown RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 PSD2Q9BQI7 771 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 TMEM79Q9BSE2 394 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 DUSP26Q9BV47 211 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 WDR54Q9H977 334 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 PLAC1Q9HBJ0 212 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 Q9N2J8 555 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 PLCXD1Q9NUJ7 323 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 RBM22Q9NW64 420 aaKnown RBP eCLIP4.45□□□□□ -1.77e-6■■■■□ 24.6
PABPC1-223ENST00000523636 RHBDL2Q9NX52 303 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 MRM2Q9UI43 246 aaKnown RBP4.45□□□□□ -1.7
PABPC1-223ENST00000523636 EMCNQ9ULC0 261 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 PTGDR2Q9Y5Y4 395 aa4.45□□□□□ -1.7
PABPC1-223ENST00000523636 PPIAL4EA0A075B759 164 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 LOC105371242A0A075B767 164 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 IGHV1-45A0A0A0MS14 117 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 A0A1B0GVG6 124 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-223ENST00000523636 SMCO3A2RU48 225 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 RNF222A6NCQ9 220 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 ARHGEF33A8MVX0 844 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 E5RI56 91 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 NPIPA3F8WFD2 350 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 G3V2L1 256 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 MS4A18H0YCH9 400 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 SIVA1O15304 175 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 SNAI2O43623 268 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 ITM2AO43736 263 aa4.44□□□□□ -1.7
PABPC1-223ENST00000523636 LYPLA1O75608 230 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms