RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 SAMSN1Q9NSI8 373 aaKnown RBP2.42□□□□□ -2.02
PCM1-219ENST00000523540 HRASLS2Q9NWW9 162 aa2.42□□□□□ -2.02
PCM1-219ENST00000523540 IKBKGQ9Y6K9 419 aa2.42□□□□□ -2.02
PCM1-219ENST00000523540 IGLV3-12A0A075B6K2 115 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 IGHV1OR15-9A0A0B4J2B8 117 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 GOLGA8OA6NCC3 632 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 GOLGA8NF8WBI6 632 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 OR2J3O76001 311 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 IGKV1-17P01599 117 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 HLA-DQA1P01909 254 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 C1GALT1C1LP0DN25 315 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 CALRP27797 417 aaKnown RBP2.41□□□□□ -2.02
PCM1-219ENST00000523540 PBLDP30039 288 aaPredicted RBP2.41□□□□□ -2.02
PCM1-219ENST00000523540 SLC1A1P43005 524 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 KIR3DL2P43630 455 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 CXCL12P48061 93 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 VSX2P58304 361 aaPredicted RBP2.41□□□□□ -2.02
PCM1-219ENST00000523540 QPRTQ15274 297 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 SNRNP35Q16560 246 aaKnown RBP2.41□□□□□ -2.02
PCM1-219ENST00000523540 PPM1LQ5SGD2 360 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 AVPI1Q5T686 147 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 CDKL3Q8IVW4 592 aaPredicted RBP2.41□□□□□ -2.02
PCM1-219ENST00000523540 CDH26Q8IXH8 852 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 GTPBP8Q8N3Z3 284 aaPredicted RBP2.41□□□□□ -2.02
PCM1-219ENST00000523540 NPWQ8N729 165 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 OR6N1Q8NGY5 312 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 CIRBP-AS1Q8TBR5 109 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 RNF157Q96PX1 679 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 DOK1Q99704 481 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 ULBP2Q9BZM5 246 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 OR52D1Q9H346 318 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 YEATS2Q9ULM3 1422 aa2.41□□□□□ -2.02
PCM1-219ENST00000523540 SMCO2A6NFE2 343 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 ZNF850A8MQ14 1090 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 SMKR1H3BMG3 65 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 L7N2F9 121 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 RNF13O43567 381 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 H6PDO95479 791 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 SERPINE2P07093 398 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 CTSLP07711 333 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 ATF6P18850 670 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 RAB3AP20336 220 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 HCAR3P49019 387 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 STXBP1P61764 594 aaKnown RBP2.4□□□□□ -2.03
PCM1-219ENST00000523540 PRR3P79522 188 aaKnown RBP2.4□□□□□ -2.03
PCM1-219ENST00000523540 C9orf135Q5VTT2 229 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 UBE2UQ5VVX9 321 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 GPR107Q5VW38 600 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 REEP3Q6NUK4 255 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 ZYG11AQ6WRX3 759 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 SLC16A13Q7RTY0 426 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 LINC01560Q8TB33 94 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 PTX4Q96A99 478 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 ZNF488Q96MN9 340 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 ANKRA2Q9H9E1 313 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 S4R3C0 116 aa2.4□□□□□ -2.03
PCM1-219ENST00000523540 TRBV11-1A0A0K0K1C0 115 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 OR6C74A6NCV1 312 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 FAM47DPA6NHR8 397 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 LYRM9A8MSI8 78 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 H0YJW9 148 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 DNASE2O00115 360 aaPredicted RBP2.39□□□□□ -2.03
PCM1-219ENST00000523540 SIRPB1O00241 398 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 CHST1O43916 411 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 FKBP6O75344 327 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 CLDN11O75508 207 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 SNX4O95219 450 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 CD74P04233 296 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 EIF4EP06730 217 aaKnown RBP2.39□□□□□ -2.03
PCM1-219ENST00000523540 OR8U9P0C7N5 309 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 GGT1P19440 569 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 P2RX1P51575 399 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 PRMT2P55345 433 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 DNLZQ5SXM8 178 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 RAET1LQ5VY80 246 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 ZFP1Q6P2D0 407 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 MBOAT1Q6ZNC8 495 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 SLC16A14Q7RTX9 510 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 WDFY1Q8IWB7 410 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 CMTM1Q8IZ96 169 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 GATSQ8NAP1 163 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 OR4A4PQ8NGN8 299 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 C17orf50Q8WW18 174 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 MICU1Q9BPX6 476 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 TIMM29Q9BSF4 260 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 TRMT112Q9UI30 125 aaKnown RBP2.39□□□□□ -2.03
PCM1-219ENST00000523540 HYOU1Q9Y4L1 999 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.39□□□□□ -2.03
PCM1-219ENST00000523540 SCN1AP35498 2009 aa2.39□□□□□ -2.03
PCM1-219ENST00000523540 SMCO3A2RU48 225 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 A8MUU9 505 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 C9JVG2 144 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 UBXN8O00124 270 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 NDUFAB1O14561 156 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 EIF4E2O60573 245 aaKnown RBP2.38□□□□□ -2.03
PCM1-219ENST00000523540 REM1O75628 298 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 CIB2O75838 187 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 ZNF806P0C7X5 589 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 CT45A6P0DMU7 189 aa2.38□□□□□ -2.03
PCM1-219ENST00000523540 CT45A5P0DMU8 189 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms