RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 TBL1XO60907 577 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 LRP3O75074 770 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 GNRH1P01148 92 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 CORO1AP31146 461 aaKnown RBP7.55□□□□□ -1.2
CSMD1-213ENST00000523488 LPAR6P43657 344 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 CEBPGP53567 150 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 SNRPNP63162 240 aaKnown RBP7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF616Q08AN1 781 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 LRRC73Q5JTD7 316 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 C1orf100Q5SVJ3 147 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ARHGAP40Q5TG30 622 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 LRRC75AQ8NAA5 344 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF511Q8NB15 262 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 OR56A1Q8NGH5 318 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 SVIPQ8NHG7 77 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 FAM174AQ8TBP5 190 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 DTD1Q8TEA8 209 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 OIT3Q8WWZ8 545 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 FGF13Q92913 245 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ANKRD9Q96BM1 317 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-213ENST00000523488 CDH20Q9HBT6 801 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.55□□□□□ -1.2
CSMD1-213ENST00000523488 TUBD1Q9UJT1 453 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 A0A087WZY1 265 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF736B4DX44 427 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-213ENST00000523488 UMAD1C9J7I0 102 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 SYT7O43581 403 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ADAP1O75689 374 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 SOD2P04179 222 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ASGR1P07306 291 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 HCKP08631 526 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 CRABP1P29762 137 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ACY1Q03154 408 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 PMS2P11Q13670 270 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 THSD4Q6ZMP0 1018 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 Q6ZRG5 221 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 TMEM150AQ86TG1 271 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 CACUL1Q86Y37 369 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 SLC35F2Q8IXU6 374 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 POC1AQ8NBT0 407 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 OR2AP1Q8NGE2 309 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 OR51D1Q8NGF3 324 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 RNF128Q8TEB7 428 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 SUSD6Q92537 303 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 PYGO2Q9BRQ0 406 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 GPR174Q9BXC1 333 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 RAB18Q9NP72 206 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 SIRT7Q9NRC8 400 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 SLC23A2Q9UGH3 650 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 FBXL21Q9UKT6 434 aa7.55□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF443Q9Y2A4 671 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-213ENST00000523488 PUS1Q9Y606 427 aaKnown RBP eCLIP7.55□□□□□ -1.2
CSMD1-213ENST00000523488 KIR2DL5BA0A0G2JN68 375 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 KIR2DL5BA0A0G2JPC4 375 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 FIGNL2A6NMB9 653 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 EFSO43281 561 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 CDC40O60508 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 SRPX2O60687 465 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 CSTBP04080 98 aaKnown RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 IFNA6P05013 189 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 HMGN2P05204 90 aaKnown RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 FBXO45P0C2W1 286 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 MSX1P28360 303 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 LSSP48449 732 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 RPS23P62266 143 aaKnown RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 CYCSP99999 105 aaKnown RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 PSG6Q00889 435 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 JOSD1Q15040 202 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 EBPQ15125 230 aaKnown RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 FAM110CQ1W6H9 321 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 RNASE10Q5GAN6 216 aaKnown RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 DCAF10Q5QP82 559 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 COL13A1Q5TAT6 717 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF385CQ66K41 422 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 UNQ6494/PRO21346Q6UXR6 183 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 CD163Q86VB7 1156 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 CDC20BQ86Y33 519 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 KIR2DL5AQ8N109 375 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 ZNF610Q8N9Z0 462 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 OR52E1Q8NGJ3 308 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 MFSD8Q8NHS3 518 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 ADAMTS15Q8TE58 950 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 CCNL2Q96S94 520 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 GPR61Q9BZJ8 451 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 RAB33BQ9H082 229 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 PARP12Q9H0J9 701 aaKnown RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 TCEAL2Q9H3H9 227 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 CXXC1Q9P0U4 656 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 PRODH2Q9UF12 536 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 TMEM235A6NFC5 223 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 GLOD5A6NK44 160 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 PRH1P02810 166 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 FCARP24071 287 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 GRPRP30550 384 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 PBX2P40425 430 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 KIR3DL2P43630 455 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 EIF3IQ13347 325 aaKnown RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 EIF2B1Q14232 305 aaKnown RBP7.54□□□□□ -1.2
CSMD1-213ENST00000523488 HAGHQ16775 308 aa7.54□□□□□ -1.2
CSMD1-213ENST00000523488 Q499Y3 187 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms