RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 MTCH1Q9NZJ7 389 aa1.25□□□□□ -2.21
PCM1-217ENST00000522998 UXTQ9UBK9 157 aaPredicted RBP1.25□□□□□ -2.21
PCM1-217ENST00000522998 CTSFQ9UBX1 484 aa1.25□□□□□ -2.21
PCM1-217ENST00000522998 MARCOQ9UEW3 520 aaPredicted RBP1.25□□□□□ -2.21
PCM1-217ENST00000522998 SDK2Q58EX2 2172 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 KIR2DS1A0A191URI9 304 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 C7orf66A4D0T2 115 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 FAM47DPA6NHR8 397 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 C9JVG2 144 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 MPHOSPH10O00566 681 aaKnown RBP1.24□□□□□ -2.21
PCM1-217ENST00000522998 AIM2O14862 343 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 SCAMP2O15127 329 aaKnown RBP1.24□□□□□ -2.21
PCM1-217ENST00000522998 CIB2O75838 187 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 RBBP9O75884 186 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 CCNKO75909 580 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 OR2J3O76001 311 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 CCNE2O96020 404 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 APCSP02743 223 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 CD74P04233 296 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 SERPINE2P07093 398 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 CTSLP07711 333 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 ANXA5P08758 320 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 CD3GP09693 182 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 C1GALT1C1LP0DN25 315 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 ZNF24P17028 368 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 ATF6P18850 670 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 DTYMKP23919 212 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 NPY1RP25929 384 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 SSTR5P35346 364 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 CSNK1EP49674 416 aaKnown RBP1.24□□□□□ -2.21
PCM1-217ENST00000522998 UBE2NP61088 152 aaKnown RBP1.24□□□□□ -2.21
PCM1-217ENST00000522998 ZNF816Q0VGE8 651 aaPredicted RBP1.24□□□□□ -2.21
PCM1-217ENST00000522998 KIR2DS1Q14954 304 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 CHRFAM7AQ494W8 412 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 METTL21CQ5VZV1 264 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 LRRC66Q68CR7 880 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 C22orf42Q6IC83 251 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 NEGR1Q7Z3B1 354 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 SCD5Q86SK9 330 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 LRP11Q86VZ4 500 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 CALHM1Q8IU99 346 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 CDKL3Q8IVW4 592 aaPredicted RBP1.24□□□□□ -2.21
PCM1-217ENST00000522998 NPWQ8N729 165 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 NECAP1Q8NC96 275 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 OR8U1Q8NH10 309 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 PIFOQ8TCI5 191 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 RNF139Q8WU17 664 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 NEURL3Q96EH8 262 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 DNAJC1Q96KC8 554 aaKnown RBP1.24□□□□□ -2.21
PCM1-217ENST00000522998 ZNF382Q96SR6 550 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 PLIN2Q99541 437 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 RNF5Q99942 180 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 ZNF2Q9BSG1 426 aaPredicted RBP1.24□□□□□ -2.21
PCM1-217ENST00000522998 ANKRD60Q9BZ19 345 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 ING2Q9H160 280 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 S4R3C0 116 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 AHDC1Q5TGY3 1603 aaPredicted RBP1.24□□□□□ -2.21
PCM1-217ENST00000522998 TRIP11Q15643 1979 aa1.24□□□□□ -2.21
PCM1-217ENST00000522998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.23□□□□□ -2.21
PCM1-217ENST00000522998 IGLV3-12A0A075B6K2 115 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 TRAV6A0A075B6T7 132 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OR6C74A6NCV1 312 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 CCDC169A6NNP5 214 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 SMKR1H3BMG3 65 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 RPL36A-HNRNPH2H7BZ11 118 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 K7EMT4 169 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 DNASE2O00115 360 aaPredicted RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 SGK1O00141 431 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 AP3B1O00203 1094 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 RRP8O43159 456 aaKnown RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 RNF13O43567 381 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 EIF4E2O60573 245 aaKnown RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 FKBP6O75344 327 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 CLDN11O75508 207 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 WBP4O75554 376 aaKnown RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 OR2F2O95006 317 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 H6PDO95479 791 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 IGLV3-19P01714 112 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 HLA-DQA1P01909 254 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 KRT14P02533 472 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 FTH1P02794 183 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 DCNP07585 359 aaKnown RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 ACSM4P0C7M7 580 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OR56A5P0C7T3 313 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 PABPC4LP0CB38 370 aaKnown RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 RAB3AP20336 220 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 CEACAM3P40198 252 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 OPRK1P41145 380 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 CXCL12P48061 93 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 HCAR3P49019 387 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 CX3CR1P49238 355 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 SYNJ2BPP57105 145 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 STXBP1P61764 594 aaKnown RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 CCNA1P78396 465 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 SP4Q02446 784 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 CDC20Q12834 499 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 SRSF5Q13243 272 aaKnown RBP1.23□□□□□ -2.21
PCM1-217ENST00000522998 HSDL1Q3SXM5 330 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 SMUG1Q53HV7 270 aa1.23□□□□□ -2.21
PCM1-217ENST00000522998 PPM1LQ5SGD2 360 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms