RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 NMNAT2Q9BZQ4 307 aa15.28■□□□□ 0.04
CLK4-211ENST00000522556 H3BN98 237 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 HPXP02790 462 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 POU1F1P28069 291 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 RBMXP38159 391 aaKnown RBP15.27■□□□□ 0.04
CLK4-211ENST00000522556 RAD52P43351 418 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 MAGEB1P43366 347 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 EVX1P49640 407 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 KLF3P57682 345 aaPredicted RBP15.27■□□□□ 0.04
CLK4-211ENST00000522556 COX10Q12887 443 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 GK3PQ14409 553 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 RSPO1Q2MKA7 263 aaPredicted RBP15.27■□□□□ 0.04
CLK4-211ENST00000522556 TMEM236Q5W0B7 351 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 SLC18B1Q6NT16 456 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 TMEM154Q6P9G4 183 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 ALDH16A1Q8IZ83 802 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 PROKR2Q8NFJ6 384 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 OR10S1Q8NGN2 331 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 OR1F12Q8NHA8 337 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 TEX47Q8TBZ9 253 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 RHNO1Q9BSD3 238 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 BCL2L14Q9BZR8 327 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 WDR76Q9H967 626 aa15.27■□□□□ 0.04
CLK4-211ENST00000522556 PNRC2Q9NPJ4 139 aaKnown RBP15.27■□□□□ 0.04
CLK4-211ENST00000522556 NDRG4Q9ULP0 352 aaKnown RBP15.27■□□□□ 0.04
CLK4-211ENST00000522556 FN1P02751 2386 aaKnown RBP15.26■□□□□ 0.03
CLK4-211ENST00000522556 VSTM5A8MXK1 200 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 VWC2LB2RUY7 222 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 ICMTO60725 284 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 ABHD16AO95870 558 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 HLA-DQA2P01906 255 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 HEXAP06865 529 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 COX5BP10606 129 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 DAOP14920 347 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 NKPD1Q17RQ9 610 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 ELFN2Q5R3F8 820 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 SHQ1Q6PI26 577 aaKnown RBP15.26■□□□□ 0.03
CLK4-211ENST00000522556 AMIGO2Q86SJ2 522 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 ZNF511Q8NB15 262 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 KLF14Q8TD94 323 aaPredicted RBP15.26■□□□□ 0.03
CLK4-211ENST00000522556 MAP6Q96JE9 813 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 RAB1BQ9H0U4 201 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 EIF3KQ9UBQ5 218 aaKnown RBP15.26■□□□□ 0.03
CLK4-211ENST00000522556 GRIP1Q9Y3R0 1128 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 COMMD3-BMI1R4GMX3 469 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 TLN2Q9Y4G6 2542 aa15.26■□□□□ 0.03
CLK4-211ENST00000522556 ZSCAN5BA6NJL1 495 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 MITFO75030 526 aaPredicted RBP15.25■□□□□ 0.03
CLK4-211ENST00000522556 SPI1P17947 270 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 GRK5P34947 590 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 PDLIM4P50479 330 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 DAPP51397 102 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 PRSS12P56730 875 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 GINS1Q14691 196 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 ATP6AP1Q15904 470 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 SPRNQ5BIV9 151 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 LINC01590Q5TEZ4 76 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 OR2T4Q8NH00 348 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 LRTOMTQ8WZ04 291 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 YIPF5Q969M3 257 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 BPESC1Q9GZL8 116 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 MMADHCQ9H3L0 296 aaPredicted RBP15.25■□□□□ 0.03
CLK4-211ENST00000522556 YY1AP1Q9H869 796 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 CMC2Q9NRP2 79 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 CYB5R1Q9UHQ9 305 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 KLHL21Q9UJP4 597 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 BAIAP2Q9UQB8 552 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 STARD10Q9Y365 291 aa15.25■□□□□ 0.03
CLK4-211ENST00000522556 ABCA1O95477 2261 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 IGHV4-61A0A0C4DH41 118 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 DEAF1O75398 565 aaPredicted RBP15.24■□□□□ 0.03
CLK4-211ENST00000522556 IGHV3-13P01766 116 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 OSMP13725 252 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 SLC25A1P53007 311 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 FAHD1Q6P587 224 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 CCDC121Q6ZUS5 278 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 NAA40Q86UY6 237 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 ATG16L2Q8NAA4 619 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 NEU4Q8WWR8 484 aaPredicted RBP15.24■□□□□ 0.03
CLK4-211ENST00000522556 DUS3LQ96G46 650 aaKnown RBP15.24■□□□□ 0.03
CLK4-211ENST00000522556 WACQ9BTA9 647 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 ABCA2Q9BZC7 2435 aa15.24■□□□□ 0.03
CLK4-211ENST00000522556 C5orf63A6NC05 138 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 RIIAD1A6NNX1 92 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 C17orf100A8MU93 164 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 M0R129 80 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 CSF3P09919 207 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 ANXA8P13928 327 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 HOXB6P17509 224 aaKnown RBP15.23■□□□□ 0.03
CLK4-211ENST00000522556 COL8A2P25067 703 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 EPHA2P29317 976 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 NR4A2P43354 598 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 MMP15P51511 669 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 DSCR9P59020 149 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 CCL8P80075 99 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 CDK5Q00535 292 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 GGTLC2Q14390 218 aa15.23■□□□□ 0.03
CLK4-211ENST00000522556 HLXQ14774 488 aaPredicted RBP15.23■□□□□ 0.03
CLK4-211ENST00000522556 KPNB1Q14974 876 aaKnown RBP15.23■□□□□ 0.03
CLK4-211ENST00000522556 TRIP10Q15642 601 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms