RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 C12orf10Q9HB07 376 aa2.06□□□□□ -2.08
PTPN12-215ENST00000522115 EPS15L1Q9UBC2 864 aa2.06□□□□□ -2.08
PTPN12-215ENST00000522115 ADAM28Q9UKQ2 775 aa2.06□□□□□ -2.08
PTPN12-215ENST00000522115 ISY1Q9ULR0 285 aaKnown RBP2.06□□□□□ -2.08
PTPN12-215ENST00000522115 TEP1Q99973 2627 aaKnown RBP2.06□□□□□ -2.08
PTPN12-215ENST00000522115 DNHD1Q96M86 4753 aa2.06□□□□□ -2.08
PTPN12-215ENST00000522115 POLR3AO14802 1390 aaPredicted RBP2.06□□□□□ -2.08
PTPN12-215ENST00000522115 ZNF609O15014 1411 aa2.06□□□□□ -2.08
PTPN12-215ENST00000522115 ADGRB1O14514 1584 aa2.06□□□□□ -2.08
PTPN12-215ENST00000522115 C4BP0C0L5 1744 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 XIRP2A4UGR9 3374 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 GOLGA8SH3BPF8 625 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 SLC25A14O95258 325 aaPredicted RBP2.05□□□□□ -2.08
PTPN12-215ENST00000522115 C2P06681 752 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 AK4P27144 223 aaPredicted RBP2.05□□□□□ -2.08
PTPN12-215ENST00000522115 SSR1P43307 286 aaKnown RBP2.05□□□□□ -2.08
PTPN12-215ENST00000522115 IRX3P78415 501 aaPredicted RBP2.05□□□□□ -2.08
PTPN12-215ENST00000522115 ARG2P78540 354 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 ZNF92Q03936 586 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 FGL1Q08830 312 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 MRPL28Q13084 256 aaKnown RBP2.05□□□□□ -2.08
PTPN12-215ENST00000522115 GINS1Q14691 196 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 ZNF77Q15935 545 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 IGFBP7Q16270 282 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 ASCL5Q7RTU5 278 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 LHFPL3Q86UP9 236 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 OSR2Q8N2R0 312 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 GATSQ8NAP1 163 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 SCFD1Q8WVM8 642 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 C10orf35Q96D05 121 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 NARS2Q96I59 477 aaKnown RBP2.05□□□□□ -2.08
PTPN12-215ENST00000522115 RPRD1AQ96P16 312 aaPredicted RBP2.05□□□□□ -2.08
PTPN12-215ENST00000522115 RNF157Q96PX1 679 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 RARRES2Q99969 163 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 NMRAL1Q9HBL8 299 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 MCCC2Q9HCC0 563 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 SNX6Q9UNH7 406 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 MRC1P22897 1456 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 WNK3Q9BYP7 1800 aa2.05□□□□□ -2.08
PTPN12-215ENST00000522115 ASPMQ8IZT6 3477 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 CCL21O00585 134 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 SNNO75324 88 aaPredicted RBP2.04□□□□□ -2.08
PTPN12-215ENST00000522115 EIF3GO75821 320 aaKnown RBP eCLIP2.04□□□□□ -2.08
PTPN12-215ENST00000522115 C5P01031 1676 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 BCHEP06276 602 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 PTMAP06454 111 aaKnown RBP2.04□□□□□ -2.08
PTPN12-215ENST00000522115 TCN2P20062 427 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 SERPINB5P36952 375 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 CSNK1A1P48729 337 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 FBXW4P57775 412 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 ZNF816Q0VGE8 651 aaPredicted RBP2.04□□□□□ -2.08
PTPN12-215ENST00000522115 CPSF1Q10570 1443 aaKnown RBP2.04□□□□□ -2.08
PTPN12-215ENST00000522115 ITSN1Q15811 1721 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 KDM7AQ6ZMT4 941 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 SLC25A48Q6ZT89 311 aaKnown RBP2.04□□□□□ -2.08
PTPN12-215ENST00000522115 HDDC2Q7Z4H3 204 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 ABHD3Q8WU67 409 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 RSPH1Q8WYR4 309 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 CREB3L1Q96BA8 519 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 MED8Q96G25 268 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 TTC25Q96NG3 672 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 PSKH2Q96QS6 385 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 CNN2Q99439 309 aaKnown RBP2.04□□□□□ -2.08
PTPN12-215ENST00000522115 TMEM43Q9BTV4 400 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 SYNDIG1Q9H7V2 258 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 POLE4Q9NR33 117 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 CDH9Q9ULB4 789 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 S4R3C0 116 aa2.04□□□□□ -2.08
PTPN12-215ENST00000522115 HELZ2Q9BYK8 2649 aaKnown RBP2.04□□□□□ -2.08
PTPN12-215ENST00000522115 MYO15AQ9UKN7 3530 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 SSC5DA1L4H1 1573 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 RAB3GAP2Q9H2M9 1393 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 USP42Q9H9J4 1324 aaKnown RBP2.03□□□□□ -2.08
PTPN12-215ENST00000522115 CLRN2A0PK11 232 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 C1orf105O95561 183 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 HLA-DPB1P04440 258 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 RDXP35241 583 aaKnown RBP2.03□□□□□ -2.08
PTPN12-215ENST00000522115 HRH1P35367 487 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 RFX3P48380 749 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 ATAD3BQ5T9A4 648 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 TEX43Q6ZNM6 134 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 LRRC75A-AS1Q8N1F1 130 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 FAM110BQ8TC76 370 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 TM4SF18Q96CE8 201 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 HSFY1Q96LI6 401 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 ZNF681Q96N22 645 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 P2RX4Q99571 388 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 ZSCAN5AQ9BUG6 496 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 ANKRD19PQ9H560 264 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 PTBP2Q9UKA9 531 aaKnown RBP2.03□□□□□ -2.08
PTPN12-215ENST00000522115 MAP1BP46821 2468 aaKnown RBP2.03□□□□□ -2.08
PTPN12-215ENST00000522115 DMDP11532 3685 aa2.03□□□□□ -2.08
PTPN12-215ENST00000522115 PTPRZ1P23471 2315 aaPredicted RBP2.03□□□□□ -2.08
PTPN12-215ENST00000522115 UBR3Q6ZT12 1888 aa2.03□□□□□ -2.09
PTPN12-215ENST00000522115 RGPD8O14715 1765 aaPredicted RBP2.03□□□□□ -2.09
PTPN12-215ENST00000522115 ABCA12Q86UK0 2595 aa2.03□□□□□ -2.09
PTPN12-215ENST00000522115 GVINP1Q7Z2Y8 2422 aa2.02□□□□□ -2.09
PTPN12-215ENST00000522115 COL1A1P02452 1464 aaPredicted RBP2.02□□□□□ -2.09
PTPN12-215ENST00000522115 MYOM3Q5VTT5 1437 aa2.02□□□□□ -2.09
PTPN12-215ENST00000522115 EIF3AQ14152 1382 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms