RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 A0A1W2PPH5 198 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 A0A1W2PPL8 197 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 A8MVM7 634 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF879B4DU55 563 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 H3BSA7 217 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 IFNL4K9M1U5 179 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 SLC28A1O00337 649 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 GPR137BO60478 399 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 FKBP6O75344 327 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 MFN2O95140 757 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 CHEK2O96017 543 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 HLA-HP01893 362 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 SERPINA5P05154 406 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 LCKP06239 509 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 CHRNGP07510 517 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 CD55P08174 381 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 MELTFP08582 738 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 OR12D1P0DN82 309 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 UROSP10746 265 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 CLUP10909 449 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 COX4I1P13073 169 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 TNFRSF1AP19438 455 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 CCNA2P20248 432 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 MATN1P21941 496 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 UQCRC2P22695 453 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 NUP62P37198 522 aaPredicted RBP4.09□□□□□ -1.75
SDCBP-207ENST00000520168 MDH2P40926 338 aaKnown RBP4.09□□□□□ -1.75
SDCBP-207ENST00000520168 CBX5P45973 191 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 HSPA13P48723 471 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 P2RY4P51582 365 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 ARHGDIBP52566 201 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 CLDN17P56750 224 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 BTG1P62324 171 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 HPCAP84074 193 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 CD69Q07108 199 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 RBBP4Q09028 425 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 CBX3Q13185 183 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 PMS2P3Q13401 168 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 SPCS2Q15005 226 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 HERPUD1Q15011 391 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 TSTQ16762 297 aaKnown RBP4.09□□□□□ -1.75
SDCBP-207ENST00000520168 TBC1D28Q2M2D7 210 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 ALKBH6Q3KRA9 238 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 NRN1LQ496H8 165 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 ATP6AP1LQ52LC2 224 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 UNC50Q53HI1 259 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 ATAD3BQ5T9A4 648 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 DHRS7BQ6IAN0 325 aaPredicted RBP4.09□□□□□ -1.75
SDCBP-207ENST00000520168 ANKRD26P1Q6NSI1 321 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 C11orf87Q6NUJ2 197 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 C5orf46Q6UWT4 87 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 C16orf89Q6UX73 402 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF813Q6ZN06 617 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 RNF165Q6ZSG1 346 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 MAVSQ7Z434 540 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 LRRC28Q86X40 367 aaPredicted RBP4.09□□□□□ -1.75
SDCBP-207ENST00000520168 RNF130Q86XS8 419 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 PTOV1Q86YD1 416 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 LDLRAD3Q86YD5 345 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF440Q8IYI8 595 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 DTX3Q8N9I9 347 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 OR5D16Q8NGK9 328 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 VANGL1Q8TAA9 524 aaPredicted RBP4.09□□□□□ -1.75
SDCBP-207ENST00000520168 RAB40AQ8WXH6 277 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 STMN2Q93045 179 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 NEURL3Q96EH8 262 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 OXGR1Q96P68 337 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 TSSK3Q96PN8 268 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 KCNA7Q96RP8 456 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 THTPAQ9BU02 230 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 NUF2Q9BZD4 464 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 MEAF6Q9HAF1 191 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 MID1IP1Q9NPA3 183 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 C8orf4Q9NR00 106 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 SLAMF8Q9P0V8 285 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 ATP6V1HQ9UI12 483 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 KCNE5Q9UJ90 142 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 RPS6KA6Q9UK32 745 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 PRPF19Q9UMS4 504 aaKnown RBP4.09□□□□□ -1.75
SDCBP-207ENST00000520168 AURKCQ9UQB9 309 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 WDR45Q9Y484 360 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 LRRC42Q9Y546 428 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 TIMM22Q9Y584 194 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 PCDHGB5Q9Y5G0 923 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 KCNE3Q9Y6H6 103 aa4.09□□□□□ -1.75
SDCBP-207ENST00000520168 DNAH1Q9P2D7 4330 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 LOC102725191A0A1B0GVB3 256 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 ZC3H12DA2A288 527 aaKnown RBP4.08□□□□□ -1.76
SDCBP-207ENST00000520168 ANKRD34BA5PLL1 514 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 BTBD17A6NE02 478 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 E9PBE3 544 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 SDHDO14521 159 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 TNFRSF13BO14836 293 aaPredicted RBP4.08□□□□□ -1.76
SDCBP-207ENST00000520168 AIM2O14862 343 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 UBDO15205 165 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 OR2T1O43869 369 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 FCMRO60667 390 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 FMO6PO60774 539 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 FZD7O75084 574 aa4.08□□□□□ -1.76
SDCBP-207ENST00000520168 FARS2O95363 451 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms