RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 WI2-2373I1.2A0A1W2PRP0 233 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 NCBP2LA6PVI3 153 aaKnown RBP3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 FAM25EA8MYX2 175 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 H0Y9J4 135 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 SPOPO43791 374 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 SCELO95171 688 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 FABP3P05413 133 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 KRT16P08779 473 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 CEACAM6P40199 344 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 CDKN2BP42772 138 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 CARD18P57730 90 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZNF121P58317 390 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 C2orf83Q53S99 150 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 GPR107Q5VW38 600 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 NPWQ8N729 165 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 CHST4Q8NCG5 386 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 ITFG1Q8TB96 612 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 MITD1Q8WV92 249 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 TOP1MTQ969P6 601 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 KIAA1143Q96AT1 154 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 TAAR1Q96RJ0 339 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 FOXC2Q99958 501 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 HDHD3Q9BSH5 251 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 SLC25A2Q9BXI2 301 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 FBXO44Q9H4M3 255 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 DYRK4Q9NR20 520 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 FAM49BQ9NUQ9 324 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 UVRAGQ9P2Y5 699 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 NEURL4Q96JN8 1562 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 GAKO14976 1311 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 IGHV3-66A0A0C4DH42 116 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 SLC25A27O95847 323 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 CEACAM3P40198 252 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 UBE2AP49459 152 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZNF136P52737 540 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 PRR3P79522 188 aaKnown RBP3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 CKAP4Q07065 602 aaKnown RBP3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 STK38Q15208 465 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 RSPO1Q2MKA7 263 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 HES5Q5TA89 166 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 CYB5R2Q6BCY4 276 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 VKORC1L1Q8N0U8 176 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZFP41Q8N8Y5 198 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 OR6Q1Q8NGQ2 317 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 PIH1D2Q8WWB5 315 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 TMEM158Q8WZ71 300 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 RAB1CQ92928 201 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 NTAN1Q96AB6 310 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 MRGPRFQ96AM1 343 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 RPEQ96AT9 228 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 APH1AQ96BI3 265 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 GPR21Q99679 349 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 OR2AG1Q9H205 316 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 MCUBQ9NWR8 336 aa3.53□□□□□ -1.84
HMGB1P46-201ENST00000520062 LTBP1Q14766 1721 aa3.53□□□□□ -1.85
HMGB1P46-201ENST00000520062 MAP3K15Q6ZN16 1313 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 TRBV6-6A0A0A6YYG2 114 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 ERI3O43414 337 aaKnown RBP3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 CD5LO43866 347 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 CA11O75493 328 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 STAG3L2P0CL84 134 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 ERGP11308 486 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 GFAPP14136 432 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 CSNK2A2P19784 350 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 HOXA9P31269 272 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 RPS10P46783 165 aaKnown RBP3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 PSMD4P55036 377 aaKnown RBP3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 LCN2P80188 198 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 GINS1Q14691 196 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 HNRNPA1L2Q32P51 320 aaKnown RBP3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 ADNP2Q6IQ32 1131 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 ARL9Q6T311 187 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 WDR82Q6UXN9 313 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 ABHD12BQ7Z5M8 362 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 MRPL55Q7Z7F7 128 aaKnown RBP3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 HORMAD1Q86X24 394 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 ZNF547Q8IVP9 402 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 CBR4Q8N4T8 237 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 OR51F2Q8NH61 342 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 CIDECQ96AQ7 238 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 NRBF2Q96F24 287 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 LZTFL1Q9NQ48 299 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 PRSS16Q9NQE7 514 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 CELA1Q9UNI1 258 aa3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 PRG3Q9Y2Y8 225 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P46-201ENST00000520062 SLC22A20A6NK97 555 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 INS-IGF2F8WCM5 200 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 PLPP1O14494 284 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 CSTAP01040 98 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 MBP02144 154 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 HLA-DPB1P04440 258 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 S100A9P06702 114 aaKnown RBP3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 DNAH10OSP0CZ25 163 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 RAB3AP20336 220 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 NOVP48745 357 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 CCNG1P51959 295 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 PPP1CBP62140 327 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 TPRG1LQ5T0D9 272 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 FBXW12Q6X9E4 464 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms