RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 LINC01560Q8TB33 94 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 ZNF488Q96MN9 340 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 DOK1Q99704 481 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 TMEM9BQ9NQ34 198 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 HRASLS2Q9NWW9 162 aa3.15□□□□□ -1.91
PTPN12-213ENST00000519553 ZNF850A8MQ14 1090 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 L7N2F9 121 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 AIM2O14862 343 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 CHST1O43916 411 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 IGHDP01880 384 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 HLA-DQA1P01909 254 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 ZNF806P0C7X5 589 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 ZNF24P17028 368 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 QPRTQ15274 297 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 MRPL23Q16540 153 aaKnown RBP3.14□□□□□ -1.91
PTPN12-213ENST00000519553 TAS2R42Q7RTR8 314 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 SLC16A13Q7RTY0 426 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 WDFY1Q8IWB7 410 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 CDH26Q8IXH8 852 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 RAB3IL1Q8TBN0 382 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 C17orf50Q8WW18 174 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 PTX4Q96A99 478 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 RASD2Q96D21 266 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 COL21A1Q96P44 957 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 RNF157Q96PX1 679 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 MICU1Q9BPX6 476 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 CENPKQ9BS16 269 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 NUP58Q9BVL2 599 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 UXTQ9UBK9 157 aaPredicted RBP3.14□□□□□ -1.91
PTPN12-213ENST00000519553 BRWD3Q6RI45 1802 aa3.14□□□□□ -1.91
PTPN12-213ENST00000519553 H0YJW9 148 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 K7EMT4 169 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 DNASE2O00115 360 aaPredicted RBP3.13□□□□□ -1.91
PTPN12-213ENST00000519553 MPHOSPH10O00566 681 aaKnown RBP3.13□□□□□ -1.91
PTPN12-213ENST00000519553 FKBP6O75344 327 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 CD74P04233 296 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 GGT1P19440 569 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 PITPNAQ00169 270 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 KPRPQ5T749 579 aaPredicted RBP3.13□□□□□ -1.91
PTPN12-213ENST00000519553 C9orf135Q5VTT2 229 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 UBE2UQ5VVX9 321 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 GPR107Q5VW38 600 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 ZFP1Q6P2D0 407 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 MBOAT1Q6ZNC8 495 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 CNPY4Q8N129 248 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 GTPBP8Q8N3Z3 284 aaPredicted RBP3.13□□□□□ -1.91
PTPN12-213ENST00000519553 NPWQ8N729 165 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 TIMM29Q9BSF4 260 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 ANKRA2Q9H9E1 313 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 SIGLEC9Q9Y336 463 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 DENND4AQ7Z401 1863 aa3.13□□□□□ -1.91
PTPN12-213ENST00000519553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.12□□□□□ -1.91
PTPN12-213ENST00000519553 GOLGA8OA6NCC3 632 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 SMCO2A6NFE2 343 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 LYRM9A8MSI8 78 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 GOLGA8NF8WBI6 632 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 K7EM74 188 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 EIF4EP06730 217 aaKnown RBP3.12□□□□□ -1.91
PTPN12-213ENST00000519553 SERPINE2P07093 398 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 CTSLP07711 333 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 OR8U9P0C7N5 309 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 TROVE2P10155 538 aaKnown RBP eCLIP3.12□□□□□ -1.91
PTPN12-213ENST00000519553 RAB3AP20336 220 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 SLC1A1P43005 524 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 HCAR3P49019 387 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 PRMT2P55345 433 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 PPP1CBP62140 327 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 PRR9Q5T870 116 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 GATSQ8NAP1 163 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 DNAJC1Q96KC8 554 aaKnown RBP3.12□□□□□ -1.91
PTPN12-213ENST00000519553 SAMSN1Q9NSI8 373 aaKnown RBP3.12□□□□□ -1.91
PTPN12-213ENST00000519553 TRMT112Q9UI30 125 aaKnown RBP3.12□□□□□ -1.91
PTPN12-213ENST00000519553 GPR179Q6PRD1 2367 aa3.12□□□□□ -1.91
PTPN12-213ENST00000519553 OR6C74A6NCV1 312 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 FAM47DPA6NHR8 397 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 SMKR1H3BMG3 65 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 SIRPB1O00241 398 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 RNF13O43567 381 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 RDH16O75452 317 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 H6PDO95479 791 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 CT45A6P0DMU7 189 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 CT45A5P0DMU8 189 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 CT45A7P0DMV0 189 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 ATF6P18850 670 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 PBLDP30039 288 aaPredicted RBP3.11□□□□□ -1.91
PTPN12-213ENST00000519553 P2RX1P51575 399 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 STXBP1P61764 594 aaKnown RBP3.11□□□□□ -1.91
PTPN12-213ENST00000519553 SP4Q02446 784 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 SELENBP1Q13228 472 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 CT45A1Q5HYN5 189 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 PRAMEF20Q5VT98 475 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 REEP3Q6NUK4 255 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 ZYG11AQ6WRX3 759 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 SLC16A14Q7RTX9 510 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 CMTM1Q8IZ96 169 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 C11orf72Q8NBR9 251 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 LILRB4Q8NHJ6 448 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 CT45A3Q8NHU0 189 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 NUBPLQ8TB37 319 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 LRRC29Q8WV35 223 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms