RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 TUBA1BP68363 451 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 CSTF1Q05048 431 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SRSF4Q08170 494 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 GAGE1Q13065 139 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 GAGE4Q13068 117 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SKP2Q13309 424 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 EBPQ15125 230 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 INAQ16352 499 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 TMEM44Q2T9K0 475 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF791Q3KP31 576 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 TIMM50Q3ZCQ8 353 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF404Q494X3 552 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 PXDC1Q5TGL8 231 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 C1orf189Q5VU69 101 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 LIPKQ5VXJ0 399 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 NXNL2Q5VZ03 156 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 LYSMD4Q5XG99 296 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 GUSBP11Q6P575 273 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 C16orf87Q6PH81 154 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SMARCD3Q6STE5 483 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 APOOLQ6UXV4 268 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 TUBA1AQ71U36 451 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 KCTD9Q7L273 389 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF550Q7Z398 422 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 GLCCI1Q86VQ1 547 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 KMT5CQ86Y97 462 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 GID4Q8IVV7 300 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 C9orf40Q8IXQ3 194 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 UBALD2Q8IYN6 164 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ZFP41Q8N8Y5 198 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF441Q8N8Z8 693 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 GATSQ8NAP1 163 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SYT14Q8NB59 555 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 OR52L1Q8NGH7 329 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 OR5M8Q8NGP6 311 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 OR4C3Q8NH37 302 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 B4GALNT2Q8NHY0 566 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 MCFD2Q8NI22 146 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF721Q8TF20 911 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 CHPT1Q8WUD6 406 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 S100ZQ8WXG8 99 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 PIGTQ969N2 578 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ADIPOR1Q96A54 375 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 EFHD2Q96C19 240 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF501Q96CX3 271 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 BPIFA2Q96DR5 249 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SENP5Q96HI0 755 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SLC25A33Q9BSK2 321 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 NUDT9Q9BW91 350 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 BARHL1Q9BZE3 327 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 VN1R1Q9GZP7 353 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 NXF5Q9H1B4 397 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 TMEM27Q9HBJ8 222 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 HMG20AQ9NP66 347 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 ISYNA1Q9NPH2 558 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 KLHL1Q9NR64 748 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 CMC2Q9NRP2 79 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 PNO1Q9NRX1 252 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 FAIMQ9NVQ4 179 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 NLGN3Q9NZ94 848 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 CTSFQ9UBX1 484 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SEC14L4Q9UDX3 406 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 PRODH2Q9UF12 536 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 MUTYHQ9UIF7 546 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 STUB1Q9UNE7 303 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 MED31Q9Y3C7 131 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 OR10H1Q9Y4A9 318 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SPIN1Q9Y657 262 aaPredicted RBP4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SDK1Q7Z5N4 2213 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 CABIN1Q9Y6J0 2220 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 FER1L5A0AVI2 2057 aa4.25□□□□□ -1.73
CTNNA1-212ENST00000518919 SCN2AQ99250 2005 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 NUP210LQ5VU65 1888 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 PCDH15Q96QU1 1955 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 A0A075B6Q4 140 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 A0A087WUJ7 227 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 A0A1B0GTQ1 180 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 PNMA8CA0A1B0GUJ8 204 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 A0A1B0GX78 115 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 SMIM30A4D0T7 59 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 C4orf47A7E2U8 309 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 C15orf62A8K5M9 175 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 A8MU76 341 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 LRRN3E7EW58 273 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 DVL1O14640 695 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 GPR137BO60478 399 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 SELENOFO60613 162 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 HCN1O60741 890 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 ICOSLGO75144 302 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 OR7A10O76100 309 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 RCBTB2O95199 551 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CSTAP01040 98 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 IGHV4-30-4P0DP06 118 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 SAGP10523 405 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CLUP10909 449 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 ZNF12P17014 697 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 MYL12AP19105 171 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 CALRP27797 417 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 HOXA6P31267 233 aa4.24□□□□□ -1.73
CTNNA1-212ENST00000518919 SLC6A6P31641 620 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms