RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 RGCCQ9H4X1 137 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 IKZF5Q9H5V7 419 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 KAT8Q9H7Z6 458 aaKnown RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 GEMIN7Q9H840 131 aaKnown RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 ZNF275Q9NSD4 429 aaPredicted RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 MED17Q9NVC6 651 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ADA2Q9NZK5 511 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 EMC3Q9P0I2 261 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 SPRR3Q9UBC9 169 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 KCNE5Q9UJ90 142 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 TBC1D24Q9ULP9 559 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ANGPT4Q9Y264 503 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ZNF443Q9Y2A4 671 aaPredicted RBP2.44□□□□□ -2.02
SKP1-204ENST00000517691 SLC35A3Q9Y2D2 325 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 ZNF337Q9Y3M9 751 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 TENM4Q6N022 2769 aa2.44□□□□□ -2.02
SKP1-204ENST00000517691 MYO18BQ8IUG5 2567 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 A0A087X0K7 114 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 IGLV3-32A0A0A0MS00 114 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 TRBV5-3A0A0A0MS03 114 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 OR2M5A3KFT3 312 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 METTL21EPA6NDL7 271 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PRORSD1PA6NEY8 169 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 B4DXG7 233 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PRSS46E5RG02 174 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PRR23D1E9PI22 279 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 NPIPB9F8W1W9 429 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 ZNF701M0R085 212 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 ZG16O60844 167 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 SHOX2O60902 331 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 BCAS1O75363 584 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 RAD51DO75771 328 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 OR5F1O95221 314 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 OPN1SWP03999 348 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 GUSBP08236 651 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 GKN3PP0CG01 181 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PRR23D2P0DMB1 279 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 PNMTP11086 282 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 GABRA1P14867 456 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 UQCRBP14927 111 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 CPN1P15169 458 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 NCK1P16333 377 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PRKACAP17612 351 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 TCN1P20061 433 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 PGCP20142 388 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 APOBEC3AP31941 199 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 SFTPDP35247 375 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 EIF1P41567 113 aaKnown RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 PTGFRP43088 359 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 CA7P43166 264 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 SLC6A8P48029 635 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 MNAT1P51948 309 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 SLC7A2P52569 658 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 CLDN15P56746 228 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 SEC61GP60059 68 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PSME3P61289 254 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 B2MP61769 119 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 RPL23AP62750 156 aaKnown RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 MRPS34P82930 218 aaKnown RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 HOXC5Q00444 222 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 RBBP4Q09028 425 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 FOXF1Q12946 379 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 SKP2Q13309 424 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 DYRK1AQ13627 763 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 QPRTQ15274 297 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 SF3B4Q15427 424 aaKnown RBP eCLIP2.43□□□□□ -2.026e-7■■■■■ 30.8
SKP1-204ENST00000517691 PLPPR5Q32ZL2 321 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 TMEM176BQ3YBM2 270 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 GLYR1Q49A26 553 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 C6orf141Q5SZD1 244 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PDSS1Q5T2R2 415 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 MRPL2Q5T653 305 aaKnown RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 PLXDC2Q6UX71 529 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 ZNF836Q6ZNA1 936 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 Q6ZPB1 254 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 Q6ZSN1 163 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 NCCRP1Q6ZVX7 275 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 P4HA3Q7Z4N8 544 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PATL1Q86TB9 770 aaKnown RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 LUZP2Q86TE4 346 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 SERPINA11Q86U17 422 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PTOV1Q86YD1 416 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 SLC30A8Q8IWU4 369 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 CHERPQ8IWX8 916 aaKnown RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 ZNF440Q8IYI8 595 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 C10orf111Q8N326 155 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 CLIP4Q8N3C7 705 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 CADM2Q8N3J6 435 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 SMYD1Q8NB12 490 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 OR2T12Q8NG77 320 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 OR8J3Q8NGG0 315 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 OR2AJ1Q8NGZ0 328 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 NDNFQ8TB73 568 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 MITD1Q8WV92 249 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 RNF138Q8WVD3 245 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 TMEM234Q8WY98 164 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 NTNG2Q96CW9 530 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 DNAJA3Q96EY1 480 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 NSL1Q96IY1 281 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PRRC1Q96M27 445 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms