RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 FAM49BQ9NUQ9 324 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 GRIN2BQ13224 1484 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 DNAH3Q8TD57 4116 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 MYO7AQ13402 2215 aa-2.15□□□□□ -2.75
RNU6-542P-201ENST00000516405 TRBV6-7A0A0A0MS04 114 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 IGHV2-70DA0A0C4DH43 119 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 TMEM89A2RUT3 159 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 GABRR3A8MPY1 467 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 NDUFC2-KCTD14E9PQ53 114 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 LOC110117498-PIK3R3F6TDL0 507 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 ATP9AO75110 1047 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 NME6O75414 186 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 STX11O75558 287 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 TRGV3P03979 118 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 ERGP11308 486 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 IFITM1P13164 125 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 PCMT1P22061 227 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 CALB2P22676 271 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 ELK4P28324 431 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 CCND3P30281 292 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 EFNA4P52798 201 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 HSPA2P54652 639 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 DGCR6Q14129 220 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 UAP1Q16222 522 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 MAP9Q49MG5 647 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 FAM133BQ5BKY9 247 aaKnown RBP-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 BMP2KLQ5H9B9 411 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 CCDC158Q5M9N0 1113 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 SCYL2Q6P3W7 929 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 LRRC8BQ6P9F7 803 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 LANCL3Q6ZV70 420 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 TMEM179Q6ZVK1 233 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 SMC5Q8IY18 1101 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 KLHDC8AQ8IYD2 350 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 METTL13Q8N6R0 699 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 BPIFB6Q8NFQ5 453 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 APOBEC3DQ96AK3 386 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 TMEM45BQ96B21 275 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 SLC39A13Q96H72 371 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 ELMO2Q96JJ3 720 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 MS4A8Q9BY19 250 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 SAMD10Q9BYL1 202 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 SMYD3Q9H7B4 428 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 DYRK4Q9NR20 520 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 AATFQ9NY61 560 aaKnown RBP eCLIP-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 JPT1Q9UK76 154 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 USH1CQ9Y6N9 552 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 MSH6P52701 1360 aa-2.16□□□□□ -2.76
RNU6-542P-201ENST00000516405 ZMYM6O95789 1325 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 ARID4BQ4LE39 1312 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 RP1P56715 2156 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 IGLV3-22A0A075B6J6 115 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 FAM74A7A6NL05 159 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 SLC22A1O15245 554 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 GMNNO75496 209 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 IGF1P05019 195 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 CLUP10909 449 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 AKR1B1P15121 316 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 ATF1P18846 271 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 BCKDHBP21953 392 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 PAICSP22234 425 aaKnown RBP-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 FGF9P31371 208 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 MPIP34949 423 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 CFHR2P36980 270 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 NNMTP40261 264 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 EIF2DP41214 584 aaKnown RBP-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 RAD52P43351 418 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 UBE2NP61088 152 aaKnown RBP-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 QRFPP83859 136 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 CDK16Q00536 496 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 TCP10Q12799 353 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 CHAF1BQ13112 559 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 WTAPQ15007 396 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 ZBTB6Q15916 424 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 MAJINQ3KP22 176 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 FAM74A3Q4VXF1 159 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 C12orf60Q5U649 245 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 NKAIN2Q5VXU1 208 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 FAM91A1Q658Y4 838 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 LRRC74BQ6ZQY2 392 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 C16orf62Q7Z3J2 963 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 ERO1BQ86YB8 467 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 C3orf22Q8N5N4 141 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 HSD17B11Q8NBQ5 300 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 MFSD8Q8NHS3 518 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 WDR36Q8NI36 951 aaKnown RBP-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 FAM3DQ96BQ1 224 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 FXYD5Q96DB9 178 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 MRPS24Q96EL2 167 aaKnown RBP-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 LINC00526Q96FQ7 95 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 CBWD1Q9BRT8 395 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 NUDT9Q9BW91 350 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 KRT23Q9C075 422 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 CYP3A43Q9HB55 503 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 MCCC2Q9HCC0 563 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 PRSS16Q9NQE7 514 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 CPSF2Q9P2I0 782 aaKnown RBP-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 AASSQ9UDR5 926 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 CYTH4Q9UIA0 394 aa-2.17□□□□□ -2.76
RNU6-542P-201ENST00000516405 MUC17Q685J3 4493 aa-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms