RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	FAIM2	Q9BWQ8	316 aa		2.27	□□□□□ -2.05
MATR3-223	ENST00000514402	UPF3B	Q9BZI7	483 aa	Known RBP	2.27	□□□□□ -2.05
MATR3-223	ENST00000514402	ACTR3C	Q9C0K3	210 aa	Predicted RBP	2.27	□□□□□ -2.05
MATR3-223	ENST00000514402	NAA50	Q9GZZ1	169 aa	Known RBP	2.27	□□□□□ -2.05
MATR3-223	ENST00000514402	TPK1	Q9H3S4	243 aa		2.27	□□□□□ -2.05
MATR3-223	ENST00000514402	PIGU	Q9H490	435 aa		2.27	□□□□□ -2.05
MATR3-223	ENST00000514402	GOLPH3	Q9H4A6	298 aa		2.27	□□□□□ -2.05
MATR3-223	ENST00000514402	LHX9	Q9NQ69	397 aa		2.27	□□□□□ -2.05
MATR3-223	ENST00000514402	UXT	Q9UBK9	157 aa	Predicted RBP	2.27	□□□□□ -2.05
MATR3-223	ENST00000514402	TRAV6	A0A075B6T7	132 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402		A0A1B0GW15	77 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	LAD1	O00515	517 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	RFXANK	O14593	260 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	SLC19A2	O60779	497 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	SCN2B	O60939	215 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	HSBP1	O75506	76 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	ERLIN2	O94905	339 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	GLA	P06280	429 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	KRT16	P08779	473 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	ICAM2	P13598	275 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	CTRB1	P17538	263 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	NPR2	P20594	1047 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	IL12A	P29459	219 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	CALCR	P30988	508 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	SLC26A3	P40879	764 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	PTGDS	P41222	190 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	KCNJ3	P48549	501 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	FBXW4	P57775	412 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	GPX6	P59796	221 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	MYL6	P60660	151 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	ACTA1	P68133	377 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	CTAG1A	P78358	180 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	MADCAM1	Q13477	382 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	VAMP3	Q15836	100 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	GABRA6	Q16445	453 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	SAMD4B	Q5PRF9	694 aa	Known RBP	2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	C1orf100	Q5SVJ3	147 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	AP1AR	Q63HQ0	302 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	CTRB2	Q6GPI1	263 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	ZNF621	Q6ZSS3	439 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	CYP4Z1	Q86W10	505 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	APRG1	Q8IVJ8	170 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	LIX1	Q8N485	282 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	OR5B3	Q8NH48	314 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	OR56B4	Q8NH76	319 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	NUBPL	Q8TB37	319 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	SLC7A13	Q8TCU3	470 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	ANP32B	Q92688	251 aa	Known RBP	2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	FGF11	Q92914	225 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	CCDC124	Q96CT7	223 aa	Known RBP	2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	ECHDC3	Q96DC8	303 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	CMTM7	Q96FZ5	175 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	FAM210A	Q96ND0	272 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	ECSIT	Q9BQ95	431 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	ZYG11B	Q9C0D3	744 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	CWH43	Q9H720	699 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	DMAP1	Q9NPF5	467 aa	Predicted RBP	2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	AGPAT4	Q9NRZ5	378 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	SAMSN1	Q9NSI8	373 aa	Known RBP	2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	MS4A12	Q9NXJ0	267 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	EURL	Q9NYK6	297 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	STMN3	Q9NZ72	180 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	SLC22A14	Q9Y267	594 aa		2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	RPL36	Q9Y3U8	105 aa	Known RBP	2.26	□□□□□ -2.05
MATR3-223	ENST00000514402	SBNO1	A3KN83	1393 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	COL1A2	P08123	1366 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	CNTNAP1	P78357	1384 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	ADGRA3	Q8IWK6	1321 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	IGLV3-22	A0A075B6J6	115 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	DCTN6	O00399	190 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	CCL21	O00585	134 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	MBTPS2	O43462	519 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	CALU	O43852	315 aa	Predicted RBP	2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	UGT1A9	O60656	530 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	LCA5L	O95447	670 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	DCN	P07585	359 aa	Known RBP	2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	CHTF8	P0CG12	524 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	IL32	P24001	234 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	HTR2C	P28335	458 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	HOXA9	P31269	272 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	FOXN2	P32314	431 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	CRAT	P43155	626 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	ATP6V0D1	P61421	351 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	SELENOT	P62341	195 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	ZNF33A	Q06730	810 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	PMS2P3	Q13401	168 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	NCF4	Q15080	339 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	PSG3	Q16557	428 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	PIGG	Q5H8A4	983 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	GPRC6A	Q5T6X5	926 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	IGFL1	Q6UW32	110 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	SPESP1	Q6UW49	350 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	TRMT10C	Q7L0Y3	403 aa	Known RBP	2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	ACOT4	Q8N9L9	421 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	NPB	Q8NG41	125 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	OR2L8	Q8NGY9	312 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	PYROXD1	Q8WU10	500 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	TFG	Q92734	400 aa	Predicted RBP	2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	SEC22A	Q96IW7	307 aa		2.25	□□□□□ -2.05
MATR3-223	ENST00000514402	CPB2	Q96IY4	423 aa		2.25	□□□□□ -2.05

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms