RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 OCM2P0CE71 109 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 RAB3BP20337 219 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 IDNKQ5T6J7 187 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 RIPPLY2Q5TAB7 128 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 DDI2Q5TDH0 399 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 FAM27BQ5VT28 67 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.32□□□□□ -0.6
PVT1-203ENST00000513868 GPR148Q8TDV2 347 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 RNF122Q9H9V4 155 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 BCO1Q9HAY6 547 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 CRLF2Q9HC73 371 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 FAM206AQ9NX38 181 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 COMMD3Q9UBI1 195 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 OR52A1Q9UKL2 312 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 MCTS1Q9ULC4 181 aaKnown RBP11.32□□□□□ -0.6
PVT1-203ENST00000513868 POLR1DQ9Y2S0 133 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 BOD1L1Q8NFC6 3051 aa11.32□□□□□ -0.6
PVT1-203ENST00000513868 ANKRD61A6NGH8 418 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 ZNF878C9JN71 531 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 H3BSH0 61 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 DLL1O00548 723 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 TFECO14948 347 aaPredicted RBP11.31□□□□□ -0.6
PVT1-203ENST00000513868 HPGDSO60760 199 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 PDGFAP04085 211 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 ISG15P05161 165 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 EPXP11678 715 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 ZNF24P17028 368 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 SOX2P48431 317 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 ZNF84P51523 738 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 ZNF79Q15937 498 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 SPANXN2Q5MJ10 180 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 ASPHD2Q6ICH7 369 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.31□□□□□ -0.6
PVT1-203ENST00000513868 TUSC5Q8IXB3 177 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 CPT1CQ8TCG5 803 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 ACOT12Q8WYK0 555 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 ALKBH3Q96Q83 286 aaPredicted RBP11.31□□□□□ -0.6
PVT1-203ENST00000513868 SLC25A18Q9H1K4 315 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 EXO5Q9H790 373 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 TMEM38BQ9NVV0 291 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 GTF2A1LQ9UNN4 478 aa11.31□□□□□ -0.6
PVT1-203ENST00000513868 AK6Q9Y3D8 172 aaKnown RBP11.31□□□□□ -0.6
PVT1-203ENST00000513868 PCDHGA9Q9Y5G4 932 aaKnown RBP11.31□□□□□ -0.6
PVT1-203ENST00000513868 TRAV8-7A0A075B6U6 113 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 A0A1B0GVC2 190 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 NOTOA8MTQ0 251 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 ZNF724A8MTY0 619 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 DOK2O60496 412 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 TTRP02766 147 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 RAF1P04049 648 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 SLC2A2P11168 524 aaPredicted RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 ADRA2CP18825 462 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 ATF1P18846 271 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 SDHBP21912 280 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 ANOS1P23352 680 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 CTSSP25774 331 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 MAPK3P27361 379 aaPredicted RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 GUCA1AP43080 201 aaPredicted RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 TSPO2Q5TGU0 170 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 STAC2Q6ZMT1 411 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 GPR137CQ8N3F9 429 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 LRRC18Q8N456 261 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 ZADH2Q8N4Q0 377 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 ASB5Q8WWX0 329 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 TMEM106AQ96A25 262 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 KCTD12Q96CX2 325 aaKnown RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 FBXO17Q96EF6 278 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 CEP19Q96LK0 163 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 SOSTQ9BQB4 213 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 GPR35Q9HC97 309 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 DDX28Q9NUL7 540 aaKnown RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 DAPK2Q9UIK4 370 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 NOSIPQ9Y314 301 aaKnown RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 MSRB2Q9Y3D2 182 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 CACNA1GO43497 2377 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 SVILO95425 2214 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 ARPC4-TTLL3A0A0A6YYG9 625 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 K7EM74 188 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 MRPL33O75394 65 aaKnown RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 TGM6O95932 706 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 APEX1P27695 318 aaKnown RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 PSMA6P60900 246 aaKnown RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 PPP3R1P63098 170 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 ZNF169Q14929 603 aaPredicted RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 RSPO1Q2MKA7 263 aaPredicted RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 CEACAM16Q2WEN9 425 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
PVT1-203ENST00000513868 ZNF544Q6NX49 715 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 LRRTM1Q86UE6 522 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 SIAH3Q8IW03 269 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 SPACA3Q8IXA5 215 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 ELMOD2Q8IZ81 293 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 GJC3Q8NFK1 279 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 TAAR6Q96RI8 345 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 LINC00470Q9BZP3 86 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 PRDM14Q9GZV8 571 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 SLCO5A1Q9H2Y9 848 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 NIPAL2Q9H841 368 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 SLC7A10Q9NS82 523 aa11.3□□□□□ -0.6
PVT1-203ENST00000513868 EMC3Q9P0I2 261 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms