RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 Q96M85 177 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 ELF4Q99607 663 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 SAMD10Q9BYL1 202 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 MED9Q9NWA0 146 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 STRAPQ9Y3F4 350 aaKnown RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 FCGR2CP31995 323 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 TLE3Q04726 772 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 ABHD17CQ6PCB6 329 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 MFSD9Q8NBP5 474 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 NPRL2Q8WTW4 380 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 SGK3Q96BR1 496 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 KCNJ15Q99712 375 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 UQCC1Q9NVA1 299 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 PRRT4C9JH25 899 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 FCMRO60667 390 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 MPEG1Q2M385 716 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 C9orf152Q5JTZ5 239 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 RPUSD3Q6P087 351 aaKnown RBP10.25□□□□□ -0.77
TCOF1-211ENST00000513346 SEZ6L2Q6UXD5 910 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 FJX1Q86VR8 437 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 TMEM229BQ8NBD8 167 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 UBAC2Q8NBM4 344 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 OR13H1Q8NG92 308 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 OR1S1Q8NH92 325 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 SLC35A4Q96G79 324 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 LIN37Q96GY3 246 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-211ENST00000513346 DCBLD2Q96PD2 775 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 SGPP1Q9BX95 441 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 ARFGEF1Q9Y6D6 1849 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 MSTNO14793 375 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 NUDT21O43809 227 aaKnown RBP10.25□□□□□ -0.77
TCOF1-211ENST00000513346 CHRM2P08172 466 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 RPL12P30050 165 aaKnown RBP10.25□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF136P52737 540 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 C21orf58P58505 322 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 MAMSTRQ6ZN01 415 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 ABHD12BQ7Z5M8 362 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-211ENST00000513346 C19orf47Q8N9M1 422 aaKnown RBP10.25□□□□□ -0.77
TCOF1-211ENST00000513346 EDEM2Q9BV94 578 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 ZFP64Q9NPA5 681 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 OR6C76A6NM76 312 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 GJE1A6NN92 205 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 BHLHE40O14503 412 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 IGF2P01344 180 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 OMGP23515 440 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 CSNK1G2P78368 415 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 OR2T2Q6IF00 324 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 RGS7BPQ6MZT1 257 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-211ENST00000513346 WDR88Q6ZMY6 472 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 UEVLDQ8IX04 471 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 COMMD1Q8N668 190 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 OR11H4Q8NGC9 324 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 HPSE2Q8WWQ2 592 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 UBL7Q96S82 380 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-211ENST00000513346 TM7SF3Q9NS93 570 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 WSB2Q9NYS7 404 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-211ENST00000513346 CACNA1CQ13936 2221 aa10.25□□□□□ -0.77
TCOF1-211ENST00000513346 K7ESM1 405 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 HLA-DQB1P01920 261 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 LAP3P28838 519 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 GUCA2AQ02747 115 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 DMWDQ09019 674 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 SLC6A18Q96N87 628 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 SDF2Q99470 211 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 GAB2Q9UQC2 676 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 FAM96BQ9Y3D0 163 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 FAM74A7A6NL05 159 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CXCL2P19875 107 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CD22P20273 847 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CCR2P41597 374 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 DVL1P1P54792 670 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-211ENST00000513346 KLF9Q13886 244 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CLINT1Q14677 625 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 FAM74A3Q4VXF1 159 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CMTM1Q8IZ96 169 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 FAM181AQ8N9Y4 354 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 TEX19Q8NA77 164 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ZFPM2Q8WW38 1151 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 SENP5Q96HI0 755 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-211ENST00000513346 BTF3L4Q96K17 158 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF75AQ96N20 296 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 SLX1AQ9BQ83 275 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 SEC11CQ9BY50 192 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CACNA1EQ15878 2313 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 TNFSF12O43508 249 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 GPR137BO60478 399 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 LRP3O75074 770 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 SEMG1P04279 462 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ABCD3P28288 659 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 AVPR2P30518 371 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 BSGP35613 385 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 DUSP5Q16690 384 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 TRIM61Q5EBN2 209 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF610Q8N9Z0 462 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CRLF2Q9HC73 371 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 FGF22Q9HCT0 170 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 CTSFQ9UBX1 484 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 FBXO4Q9UKT5 387 aa10.24□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF831Q5JPB2 1677 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms