RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 BSGP35613 385 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TCTN1Q2MV58 587 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 PWWP2BQ6NUJ5 590 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 GLIPR1L1Q6UWM5 242 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ADGRE4PQ86SQ3 457 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SPICQ8N5J4 248 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 OR2AK2Q8NG84 335 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 RBMXL1Q96E39 390 aaKnown RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 ARL6Q9H0F7 186 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 EMC7Q9NPA0 242 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ANKRD36CQ5JPF3 1778 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TMPRSS11DO60235 418 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 LY86O95711 162 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 PRF1P14222 555 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 DLX5P56178 289 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 UBE2G2P60604 165 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.85□□□□□ -1.79
VCAN-209ENST00000513016 DRAM2Q6UX65 266 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 Q6ZSR9 355 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 FAM58AQ8N1B3 248 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SEH1LQ96EE3 360 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 THYN1Q9P016 225 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 UBQLN2Q9UHD9 624 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SCN7AQ01118 1682 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 LOC100289279A0A1B0GTE1 492 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 A0A1W2PQL4 384 aaPredicted RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 TMEM30CPA0ZSE6 113 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ALG1L2C9J202 215 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 HS3ST1O14792 307 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 EDIL3O43854 480 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 DFFBO76075 338 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SOD1P00441 154 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 AADACP22760 399 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 HOXC8P31273 242 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 NR4A2P43354 598 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 MTNR1BP49286 362 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ACSM1Q08AH1 577 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 CDC20Q12834 499 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 CTU2Q2VPK5 515 aaKnown RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 FAM209AQ5JX71 171 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ATPAF1Q5TC12 328 aaPredicted RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 CD276Q5ZPR3 534 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TRILQ7L0X0 811 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 OR2Z1Q8NG97 314 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 RASD2Q96D21 266 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 CXXC4Q9H2H0 198 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TAS2R3Q9NYW6 316 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ASH2LQ9UBL3 628 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TRBV4-1A0A0J9YWV2 114 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 PRSS37A4D1T9 235 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ATP6V1G1O75348 118 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 NCR1O76036 304 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ZNF883P0CG24 379 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 GABRB3P28472 473 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 BAXQ07812 192 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 C19orf57Q0VDD7 668 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ANKRD34AQ69YU3 496 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ANGPTL5Q86XS5 388 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ADGRG3Q86Y34 549 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SORT1Q99523 831 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ADAT1Q9BUB4 502 aaKnown RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 SIAEQ9HAT2 523 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 C12orf10Q9HB07 376 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TAAR3PQ9P1P4 343 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ATPIF1Q9UII2 106 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 GPR55Q9Y2T6 319 aaPredicted RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 CACNG2Q9Y698 323 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 MYH13Q9UKX3 1938 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 IGHV5-10-1A0A0J9YXX1 117 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 A0A1W2PS29 197 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 HSBP1L1C9JCN9 74 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SULT1B1O43704 296 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SSX5O60225 188 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ATP1B1P05026 303 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SP1P08047 785 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 RPS2P15880 293 aaKnown RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 PPP3CBP16298 524 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 GABRA5P31644 462 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 KCNJ3P48549 501 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TAS2R45P59539 299 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 IGFBP7Q16270 282 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 AADACL4Q5VUY2 407 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 HEPHL1Q6MZM0 1159 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SPNS3Q6ZMD2 512 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 CYHR1Q6ZMK1 362 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ZNF679Q8IYX0 411 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 OR1M1Q8NGA1 313 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 OR1F12Q8NHA8 337 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 HMGCLL1Q8TB92 370 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 UTP4Q969X6 686 aaKnown RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 TMEM106AQ96A25 262 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ISL2Q96A47 359 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 TM4SF19Q96DZ7 209 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 PELI1Q96FA3 418 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 ZNF649Q9BS31 505 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 SF3B5Q9BWJ5 86 aaKnown RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 UBQLN3Q9H347 655 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 LPAR3Q9UBY5 353 aa3.85□□□□□ -1.79
VCAN-209ENST00000513016 DDX60Q8IY21 1712 aaKnown RBP3.85□□□□□ -1.79
VCAN-209ENST00000513016 SIRPB1O00241 398 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms