RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TEX9Q8N6V9 391 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 MFSD9Q8NBP5 474 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 ZNF740Q8NDX6 193 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 OR11G2Q8NGC1 345 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 OR5T3Q8NGG3 340 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 STAG3L4Q8TBR4 150 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 ANKRD49Q8WVL7 239 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 SLC5A11Q8WWX8 675 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 IL1F10Q8WWZ1 152 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 NEIL2Q969S2 332 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 UPRTQ96BW1 309 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 OR2A5Q96R48 311 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 CCDC77Q9BR77 488 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 ZNF416Q9BWM5 594 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 CAPS2Q9BXY5 557 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 RHOJQ9H4E5 214 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 NMRAL1Q9HBL8 299 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 AGPAT4Q9NRZ5 378 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 ASF1BQ9NVP2 202 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 FAM120CQ9NX05 1096 aaKnown RBP3.26□□□□□ -1.89
HTT-210ENST00000512909 TAS2R3Q9NYW6 316 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 EXOSC1Q9Y3B2 195 aaKnown RBP3.26□□□□□ -1.89
HTT-210ENST00000512909 AP4B1Q9Y6B7 739 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 PCNX3Q9H6A9 2034 aa3.26□□□□□ -1.89
HTT-210ENST00000512909 DMXL1Q9Y485 3027 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 TP53BP1Q12888 1972 aaPredicted RBP3.25□□□□□ -1.89
HTT-210ENST00000512909 VPS13AQ96RL7 3174 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 A0A087WZY1 265 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 IGKV1-8A0A0C4DH67 115 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 TCRBV9S1A1TA0A576 114 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 SMIM23A6NLE4 172 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 H0YL77 283 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 UBXN8O00124 270 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 SAP18O00422 153 aaKnown RBP3.25□□□□□ -1.89
HTT-210ENST00000512909 E2F3O00716 465 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 ERI3O43414 337 aaKnown RBP3.25□□□□□ -1.89
HTT-210ENST00000512909 ZNF354AO60765 605 aaPredicted RBP3.25□□□□□ -1.89
HTT-210ENST00000512909 DNAJB6O75190 326 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 SMIM24O75264 130 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 ZNF253O75346 499 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 PTBP3O95758 552 aaKnown RBP3.25□□□□□ -1.89
HTT-210ENST00000512909 THY1P04216 161 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 RNH1P13489 461 aaKnown RBP3.25□□□□□ -1.89
HTT-210ENST00000512909 GATA2P23769 480 aaPredicted RBP3.25□□□□□ -1.89
HTT-210ENST00000512909 SLC26A3P40879 764 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 MAGEA3P43357 314 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 HNMTP50135 292 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 P2RY4P51582 365 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 GPX6P59796 221 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 RAB10P61026 200 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 ATP6V0D1P61421 351 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 HTD2P86397 168 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 TGM3Q08188 693 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 STX4Q12846 297 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 PDZK1IP1Q13113 114 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 CHIT1Q13231 466 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 FAM53BQ14153 422 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 DOC2AQ14183 400 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 Q1RN00 199 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 FAM83EQ2M2I3 478 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 PRR30Q53SZ7 412 aaPredicted RBP3.25□□□□□ -1.89
HTT-210ENST00000512909 PAGE2BQ5JRK9 111 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 DCST2Q5T1A1 773 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 STEAP4Q687X5 459 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 SULT1C3Q6IMI6 304 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 LEG1Q6P5S2 330 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 TRIM40Q6P9F5 258 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 TMIGD1Q6UXZ0 262 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 LANCL3Q6ZV70 420 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 COX15Q7KZN9 410 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 PRSS48Q7RTY5 328 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 ERASQ7Z444 233 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 ANKRD37Q7Z713 158 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 CMC1Q7Z7K0 106 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 IFNEQ86WN2 208 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 GCNT2Q8N0V5 402 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 TCAIMQ8N3R3 496 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 CD177Q8N6Q3 437 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 CEP112Q8N8E3 955 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 DOK4Q8TEW6 326 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 KCTD4Q8WVF5 259 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 AKR1E2Q96JD6 320 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 FOXN4Q96NZ1 517 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 RBBP8Q99708 897 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 DEFB126Q9BYW3 111 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 DERL2Q9GZP9 239 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 CHRNA10Q9GZZ6 450 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 WDR54Q9H977 334 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 LIN28AQ9H9Z2 209 aaKnown RBP3.25□□□□□ -1.89
HTT-210ENST00000512909 PRTFDC1Q9NRG1 225 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 SLC7A10Q9NS82 523 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 C14orf105Q9NVL8 296 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 OPTCQ9UBM4 332 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 SH3BGRL2Q9UJC5 107 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 VSIG4Q9Y279 399 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 OARD1Q9Y530 152 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 KLF2Q9Y5W3 355 aaPredicted RBP3.25□□□□□ -1.89
HTT-210ENST00000512909 U3KQV3 271 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 SPACA6W5XKT8 324 aa3.25□□□□□ -1.89
HTT-210ENST00000512909 CNOT1A5YKK6 2376 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms