RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 MRPL55Q7Z7F7 128 aaKnown RBP2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 METTL13Q8N6R0 699 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 PQLC3Q8N755 202 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 OR9G4Q8NGQ1 327 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 OR2L8Q8NGY9 312 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 OR5K2Q8NHB8 316 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 UBALD1Q8TB05 177 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 SPNS1Q9H2V7 528 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 C12orf10Q9HB07 376 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 CYTL1Q9NRR1 136 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 ZNRD1Q9P1U0 126 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 DUX4Q9UBX2 424 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 CLN8Q9UBY8 286 aa2.47□□□□□ -2.01
HMGB1P28-201ENST00000507778 KCNE1BA0A087WTH5 132 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR6C74A6NCV1 312 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 FLOT1O75955 427 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 LSM8O95777 96 aaKnown RBP2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 CD160O95971 181 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 EIF4EP06730 217 aaKnown RBP2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 FGF4P08620 206 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 CD3GP09693 182 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 ATF6P18850 670 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 GSTM3P21266 225 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 U2AF2P26368 475 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR1E1P30953 314 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 HCAR3P49019 387 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 P2RX1P51575 399 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 PPP1CBP62140 327 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 ESRRGP62508 458 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 IFT88Q13099 833 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 RCAN2Q14206 197 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 LINC00483Q53H64 154 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 Q6ZR03 302 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 OFCC1Q8IZS5 231 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 JAGN1Q8N5M9 183 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 NPWQ8N729 165 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 CHST4Q8NCG5 386 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 BBOF1Q8ND07 529 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 LRRC29Q8WV35 223 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 APH1BQ8WW43 257 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 UCK2Q9BZX2 261 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 NTN4Q9HB63 628 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 BEX1Q9HBH7 125 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 ZNF355PQ9NSJ1 428 aa2.46□□□□□ -2.02
HMGB1P28-201ENST00000507778 IGLV4-60A0A075B6I1 120 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 TEX46H3BTG2 121 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 RAD51CO43502 376 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 CDC40O60508 579 aaKnown RBP eCLIP2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 CTAG2O75638 210 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 AQP8O94778 261 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 CISD3P0C7P0 127 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR8G3PP0DMU2 310 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 ERGP11308 486 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 SSTR5P35346 364 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 LINC00315P59091 139 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 SEMG2Q02383 582 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 SYCNQ0VAF6 134 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 ILKQ13418 452 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 EIF4EBP1Q13541 118 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 STK11Q15831 433 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 FAM78AQ5JUQ0 283 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 TPTE2P1Q5T6R2 138 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 FBXW9Q5XUX1 488 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 STUMQ69YW2 141 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 PRMT9Q6P2P2 845 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 CLEC2AQ6UVW9 174 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 C12orf54Q6X4T0 127 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 MBOAT2Q6ZWT7 520 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 ABHD12BQ7Z5M8 362 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 ZNF695Q8IW36 515 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 RIMKLAQ8IXN7 391 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 CBR4Q8N4T8 237 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 BPIFCQ8NFQ6 507 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR10AD1Q8NGE0 317 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR52E2Q8NGJ4 325 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 PIFOQ8TCI5 191 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 ZNF382Q96SR6 550 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 ANP32EQ9BTT0 268 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 TEKT3Q9BXF9 490 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 ANKRD60Q9BZ19 345 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 ELOVL6Q9H5J4 265 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 TMEM38AQ9H6F2 299 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 ZNF430Q9H8G1 570 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 MRM3Q9HC36 420 aaKnown RBP2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 AGPAT4Q9NRZ5 378 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 DDX19AQ9NUU7 478 aaKnown RBP2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 NECAP2Q9NVZ3 263 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 CAB39Q9Y376 341 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 HYOU1Q9Y4L1 999 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 YTHDF2Q9Y5A9 579 aaKnown RBP2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 TMEM14AQ9Y6G1 99 aa2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 GPATCH8Q9UKJ3 1502 aaKnown RBP2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 COL22A1Q8NFW1 1626 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P28-201ENST00000507778 UBN2Q6ZU65 1347 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 IGSF9BQ9UPX0 1349 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 ADAMTS13Q76LX8 1427 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 K7EMT4 169 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 L7N2F9 121 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 M0R3G1 203 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 SLC9A3R1O14745 358 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms