RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SORL1Q92673 2214 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 WDR91A4D1P6 747 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 MEGF11A6BM72 1044 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 J3QL48 77 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 HMGN4O00479 90 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 PLPP3O14495 311 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 LSM1O15116 133 aaKnown RBP5.82□□□□□ -1.48
VCAN-207ENST00000507162 HDAC3O15379 428 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 PEX11AO75192 247 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 LY86O95711 162 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 GYPAP02724 150 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 NEFHP12036 1026 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 RAB13P51153 203 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 UBE2E1P51965 193 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 CLRN1P58418 232 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 IL5RAQ01344 420 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 CNN3Q15417 329 aaKnown RBP5.82□□□□□ -1.48
VCAN-207ENST00000507162 LIN52Q52LA3 116 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 PLA1AQ53H76 456 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 OR4F3Q6IEY1 312 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 OR2T2Q6IF00 324 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 METAP1DQ6UB28 335 aaPredicted RBP5.82□□□□□ -1.48
VCAN-207ENST00000507162 LRRC74BQ6ZQY2 392 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 ZNF662Q6ZS27 426 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 TMEM219Q86XT9 240 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 C10orf111Q8N326 155 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 FGFRL1Q8N441 504 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 PTP4A1Q93096 173 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 MCHR2Q969V1 340 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 SLC41A3Q96GZ6 507 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 SLC25A44Q96H78 314 aaPredicted RBP5.82□□□□□ -1.48
VCAN-207ENST00000507162 TEX37Q96LM6 180 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 C1orf50Q9BV19 199 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 WNT5BQ9H1J7 359 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 SIAEQ9HAT2 523 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 KLHL14Q9P2G3 628 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 MARCOQ9UEW3 520 aaPredicted RBP5.82□□□□□ -1.48
VCAN-207ENST00000507162 PRDM4Q9UKN5 801 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 ZNF232Q9UNY5 417 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 CAPN7Q9Y6W3 813 aa5.82□□□□□ -1.48
VCAN-207ENST00000507162 IGKV1D-42A0A075B6H8 117 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 LRRN3E7EW58 273 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 LGALS8O00214 317 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 AZIN1O14977 448 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 FAM20BO75063 409 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 GLRA3O75311 464 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 LYPLA1O75608 230 aaPredicted RBP5.81□□□□□ -1.48
VCAN-207ENST00000507162 LY6G6CO95867 125 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 CHEK2O96017 543 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 IGF2P01344 180 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 C1QCP02747 245 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 BGLAPP02818 100 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 HLA-DPB1P04440 258 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 RPS4Y1P22090 263 aaKnown RBP5.81□□□□□ -1.48
VCAN-207ENST00000507162 MYF6P23409 242 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 ANP32AP39687 249 aaKnown RBP5.81□□□□□ -1.48
VCAN-207ENST00000507162 SERPINB9P50453 376 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 RAB25P57735 213 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 BLCAPP62952 87 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 GUCY1A3Q02108 690 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 ACSM1Q08AH1 577 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 C5orf46Q6UWT4 87 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 COLCA1Q6ZS62 124 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 SATL1Q86VE3 508 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 ANKRD46Q86W74 232 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 Q8N7P7 452 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 NPEPL1Q8NDH3 523 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 OR8G5Q8NG78 346 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 OR51D1Q8NGF3 324 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 PIFOQ8TCI5 191 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 FBXO25Q8TCJ0 367 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 AENQ8WTP8 325 aaKnown RBP5.81□□□□□ -1.48
VCAN-207ENST00000507162 ZNF583Q96ND8 569 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 ZNF582Q96NG8 517 aaPredicted RBP5.81□□□□□ -1.48
VCAN-207ENST00000507162 MOGAT1Q96PD6 335 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 ZNF347Q96SE7 839 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 OR2H1Q9GZK4 316 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 TUBB1Q9H4B7 451 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 MRPL39Q9NYK5 338 aaKnown RBP5.81□□□□□ -1.48
VCAN-207ENST00000507162 SNX12Q9UMY4 172 aa5.81□□□□□ -1.48
VCAN-207ENST00000507162 SF3B6Q9Y3B4 125 aaKnown RBP5.81□□□□□ -1.48
VCAN-207ENST00000507162 DNAH10Q8IVF4 4471 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 TRAV38-1A0A0B4J264 116 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 H3BQF6 201 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 RNF13O43567 381 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 NDUFA2O43678 99 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 FCN3O75636 299 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 IGHG1P01857 330 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 IGHA1P01876 353 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 ALDOBP05062 364 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 PGA4P0DJD7 388 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 PGA3P0DJD8 388 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 ETFAP13804 333 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 PRPS1L1P21108 318 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 THBS3P49746 956 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 RGS6P49758 472 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 LUMP51884 338 aaPredicted RBP5.8□□□□□ -1.48
VCAN-207ENST00000507162 MPPED2Q15777 294 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 NPTX1Q15818 432 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 PRAMEF6Q5VXH4 476 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms