RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 FAM216AQ8WUB2 273 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 CANT1Q8WVQ1 401 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 CCL17Q92583 94 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 RAB1CQ92928 201 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 NMD3Q96D46 503 aaKnown RBP13.79□□□□□ -0.2
SNX2-205ENST00000506874 ELMOD3Q96FG2 381 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 Q96M85 177 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 SLC6A7Q99884 636 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 CHID1Q9BWS9 393 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 NDEL1Q9GZM8 345 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 SIAEQ9HAT2 523 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 EIF3KQ9UBQ5 218 aaKnown RBP13.79□□□□□ -0.2
SNX2-205ENST00000506874 GRHPRQ9UBQ7 328 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 IL20RAQ9UHF4 553 aa13.79□□□□□ -0.2
SNX2-205ENST00000506874 IGKV1D-43A0A0B4J1Z2 117 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 ISPDA4D126 451 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 C5orf49A4QMS7 147 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 A6NIZ1 184 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 IGHV1-46P01743 117 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 FPR3P25089 353 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 WNT5AP41221 380 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 GSSP48637 474 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 ERFP50548 548 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 ZNF133P52736 654 aaPredicted RBP13.78□□□□□ -0.2
SNX2-205ENST00000506874 RAP1BP61224 184 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 RAP1AP62834 184 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 MRPS34P82930 218 aaKnown RBP13.78□□□□□ -0.2
SNX2-205ENST00000506874 CD47Q08722 323 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 C10orf128Q5T292 105 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 FAM205BPQ63HN1 556 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 C1orf94Q6P1W5 598 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 USP43Q70EL4 1123 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 FAM122BQ7Z309 247 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 C1QL2Q7Z5L3 287 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 OR9Q2Q8NGE9 314 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 SLC25A40Q8TBP6 338 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 FANK1Q8TC84 345 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 GNPDA2Q8TDQ7 276 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 IPCEF1Q8WWN9 437 aaPredicted RBP13.78□□□□□ -0.2
SNX2-205ENST00000506874 JMJD8Q96S16 334 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 GAL3ST1Q99999 423 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 ALG12Q9BV10 488 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 RBM4Q9BWF3 364 aaKnown RBP13.78□□□□□ -0.2
SNX2-205ENST00000506874 REEP1Q9H902 201 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 UBAP1Q9NZ09 502 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 UGT2A1Q9Y4X1 527 aa13.78□□□□□ -0.2
SNX2-205ENST00000506874 LOC100509620A0A075B734 347 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 TCRBV3S1A0A5B6 114 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 PLSCR5A0PG75 271 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 TMEM89A2RUT3 159 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 H7C1C5 153 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 MGRN1O60291 552 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 CCNB2O95067 398 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 COMPP49747 757 aaPredicted RBP13.77□□□□□ -0.21
SNX2-205ENST00000506874 GDI2P50395 445 aaKnown RBP13.77□□□□□ -0.21
SNX2-205ENST00000506874 LCN6P62502 163 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 LCN2P80188 198 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 PSG4Q00888 419 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 TSPAN31Q12999 210 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 HNRNPA0Q13151 305 aaKnown RBP13.77□□□□□ -0.21
SNX2-205ENST00000506874 TMEM255AQ5JRV8 349 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 ZNF770Q6IQ21 691 aaPredicted RBP13.77□□□□□ -0.21
SNX2-205ENST00000506874 SLC25A47Q6Q0C1 308 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 SMARCD3Q6STE5 483 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 BPIFB2Q8N4F0 458 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 LINC00471Q8N535 108 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 ABHD4Q8TB40 342 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 NANPQ8TBE9 248 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 C22orf15Q8WYQ4 148 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 NABP1Q96AH0 204 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 RASD2Q96D21 266 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 MARS2Q96GW9 593 aaKnown RBP13.77□□□□□ -0.21
SNX2-205ENST00000506874 POM121L2Q96KW2 1035 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 ZNF570Q96NI8 536 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 RBP7Q96R05 134 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 GPX7Q96SL4 187 aaPredicted RBP13.77□□□□□ -0.21
SNX2-205ENST00000506874 SUCNR1Q9BXA5 334 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 OR2J1Q9GZK6 312 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 C7orf69Q9H7B7 122 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 SMURF2Q9HAU4 748 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 NRIP3Q9NQ35 241 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 SAMHD1Q9Y3Z3 626 aaKnown RBP13.77□□□□□ -0.21
SNX2-205ENST00000506874 U3KQV3 271 aa13.77□□□□□ -0.21
SNX2-205ENST00000506874 TEX13CA0A0J9YWL9 993 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 ZSCAN5BA6NJL1 495 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 J3QLI3 93 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 WIPF1O43516 503 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 PPP1R3DO95685 299 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 CST1P01037 141 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 NR2C1P13056 603 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 EGR1P18146 543 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 MMP15P51511 669 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 RFX4Q33E94 735 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 SPRNQ5BIV9 151 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 MESTQ5EB52 335 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 FAM209AQ5JX71 171 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 DPY19L2P2Q6ZN68 376 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 RFPL4BQ6ZWI9 263 aa13.76□□□□□ -0.21
SNX2-205ENST00000506874 KLF14Q8TD94 323 aaPredicted RBP13.76□□□□□ -0.21
SNX2-205ENST00000506874 EGLN1Q9GZT9 426 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms