RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SETD9Q8NE22 299 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 OR6N2Q8NGY6 317 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 OTOSQ8NHW6 89 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 FBLIM1Q8WUP2 373 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 RFKQ969G6 155 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 Q96MT0 163 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 COQ7Q99807 217 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 YIPF3Q9GZM5 350 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 HDHD2Q9H0R4 259 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 RASSF4Q9H2L5 321 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 ADGRL4Q9HBW9 690 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 PLEK2Q9NYT0 353 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.12□□□□□ -0.63
TCOF1-210ENST00000506767 PKDREJQ9NTG1 2253 aa11.12□□□□□ -0.63
TCOF1-210ENST00000506767 RAI1Q7Z5J4 1906 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-210ENST00000506767 ATP6V1G2-DDX39BF2Z307 99 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 ICMTO60725 284 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 SBK2P0C263 348 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 CCL2P13500 99 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 ALOX5APP20292 161 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 APLNRP35414 380 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 NAA10P41227 235 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-210ENST00000506767 IL5RAQ01344 420 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 HGFACQ04756 655 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 TBC1D28Q2M2D7 210 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 C6orf52Q5T4I8 152 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 RHOUQ7L0Q8 258 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 PAQR4Q8N4S7 273 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-210ENST00000506767 ZNF454Q8N9F8 522 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 KBTBD8Q8NFY9 601 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 OR1J2Q8NGS2 313 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 OR1F12Q8NHA8 337 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 CNN2Q99439 309 aaKnown RBP11.11□□□□□ -0.63
TCOF1-210ENST00000506767 ABHD6Q9BV23 337 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 CLEC4MQ9H2X3 399 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-210ENST00000506767 PLEKHF2Q9H8W4 249 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 DDX28Q9NUL7 540 aaKnown RBP11.11□□□□□ -0.63
TCOF1-210ENST00000506767 CLN6Q9NWW5 311 aa11.11□□□□□ -0.63
TCOF1-210ENST00000506767 C5orf49A4QMS7 147 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 SNTNA6NMZ2 147 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 MRPL3P09001 348 aaKnown RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 NR4A1P22736 598 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 PCSK6P29122 969 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 OTX1P32242 354 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 HTR5AP47898 357 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 MTNR1AP48039 350 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 HSPA13P48723 471 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 GDI2P50395 445 aaKnown RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 HCCSP53701 268 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 NKX6-1P78426 367 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 POU4F2Q12837 409 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 ECH1Q13011 328 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 EIF2B1Q14232 305 aaKnown RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 ZNF672Q499Z4 452 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 LAIR2Q6ISS4 152 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 TMEM154Q6P9G4 183 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 SLC22A25Q6T423 547 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 TMEM200AQ86VY9 491 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 C8orf59Q8N0T1 100 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 NUP37Q8NFH4 326 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 OR4F15Q8NGB8 312 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 OR51G2Q8NGK0 314 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 CNIH3Q8TBE1 160 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 SMAP2Q8WU79 429 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 RNF133Q8WVZ7 376 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 SLC7A6Q92536 515 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 NEUROG1Q92886 237 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 SLAMF6Q96DU3 332 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 AMELYQ99218 206 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 MNTQ99583 582 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 ATF6BQ99941 703 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 KCNS3Q9BQ31 491 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 HEATR1Q9H583 2144 aaKnown RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 MRPS18AQ9NVS2 196 aaKnown RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 EXOGQ9Y2C4 368 aaKnown RBP11.1□□□□□ -0.63
TCOF1-210ENST00000506767 KLHDC2Q9Y2U9 406 aa11.1□□□□□ -0.63
TCOF1-210ENST00000506767 ZNF878C9JN71 531 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 E7EQL1 145 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 J3QRE1 110 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 LYNP07948 512 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 DBTP11182 482 aaKnown RBP11.09□□□□□ -0.63
TCOF1-210ENST00000506767 WNT5AP41221 380 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 NUDT6P53370 316 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 KRTAP10-9P60411 292 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 ZNF91Q05481 1191 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 CDK5R2Q13319 367 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 SNCBQ16143 134 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 SMN1Q16637 294 aaKnown RBP11.09□□□□□ -0.63
TCOF1-210ENST00000506767 THAP5Q7Z6K1 395 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 SLC35F2Q8IXU6 374 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 AKAP1Q92667 903 aaKnown RBP eCLIP11.09□□□□□ -0.63
TCOF1-210ENST00000506767 DCLRE1CQ96SD1 692 aaKnown RBP11.09□□□□□ -0.63
TCOF1-210ENST00000506767 ANKRD60Q9BZ19 345 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 CDH20Q9HBT6 801 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 RAB26Q9ULW5 256 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 COPS3Q9UNS2 423 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 TMEM14AQ9Y6G1 99 aa11.09□□□□□ -0.63
TCOF1-210ENST00000506767 HS3ST1O14792 307 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 DBHP09172 617 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 OR2T7P0C7T2 308 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms