RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 KCTD14Q9BQ13 255 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 PELOQ9BRX2 385 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 C20orf85Q9H1P6 137 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 SH2D2AQ9NP31 389 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 DDX19AQ9NUU7 478 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 AIG1Q9NVV5 245 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 VNN3Q9NY84 501 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 CLEC4EQ9ULY5 219 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 MMP17Q9ULZ9 603 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 MOKQ9UQ07 419 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 ASF1AQ9Y294 204 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 CFAP47Q6ZTR5 3102 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 PHLPP2Q6ZVD8 1323 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 ATRXP46100 2492 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 ANKRD11Q6UB99 2663 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 FRYQ5TBA9 3013 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 GOLGA6L7A0A1B0GV03 622 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 FAM168BA1KXE4 195 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 LRRIQ3A6PVS8 624 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 SPECC1L-ADORA2AF8WAN1 911 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 TNFSF11O14788 317 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 RAB29O14966 203 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 SLC16A4O15374 487 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 HCRTO43612 131 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 GAS8-AS1O95177 125 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 LYPLA2O95372 231 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 HSPB1P04792 205 aaKnown RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 GIG44P09565 113 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 P0C879 139 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR8G3PP0DMU2 310 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 RALBP11234 206 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 TCN1P20061 433 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 HOXA9P31269 272 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 NAA10P41227 235 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 MAGEA1P43355 309 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 NAMPTP43490 491 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 TFPI2P48307 235 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 RAB10P61026 200 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 PDIA2Q13087 525 aaKnown RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 ARFRP1Q13795 201 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 PON2Q15165 354 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 MRPL23Q16540 153 aaKnown RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 C1orf100Q5SVJ3 147 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 C9orf135Q5VTT2 229 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 SDHAF4Q5VUM1 108 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 C1orf94Q6P1W5 598 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 TMEM53Q6P2H8 277 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 PRSS41Q7RTY9 318 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 TMEM179BQ7Z7N9 219 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZNF546Q86UE3 836 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 OFCC1Q8IZS5 231 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 GABRG1Q8N1C3 465 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 FBXL16Q8N461 479 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 LIX1Q8N485 282 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 CD177Q8N6Q3 437 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 BBS1Q8NFJ9 593 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR4A4PQ8NGN8 299 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZNF564Q8TBZ8 553 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 ACOT11Q8WXI4 607 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 KIFAP3Q92845 792 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 MARC2Q969Z3 335 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 GSDMAQ96QA5 445 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 TSG101Q99816 390 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 CCDC94Q9BW85 323 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 RACGAP1Q9H0H5 632 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 RNF167Q9H6Y7 350 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 RANBP3Q9H6Z4 567 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 PLGRKTQ9HBL7 147 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 ADAP2Q9NPF8 381 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZDHHC4Q9NPG8 344 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 SAMSN1Q9NSI8 373 aaKnown RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 C20orf96Q9NUD7 363 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 EXD2Q9NVH0 621 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 CCL26Q9Y258 94 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 PKD1L2Q7Z442 2459 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 C2orf16Q68DN1 1984 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 SPEGQ15772 3267 aa2.37□□□□□ -2.03
TRAPPC11-205ENST00000506426 LAMA5O15230 3695 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 WDFY3Q8IZQ1 3526 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 PPP1R2P9O14990 202 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 AGPAT2O15120 278 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZNF780AO75290 641 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 ERCC1P07992 297 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 ANXA5P08758 320 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 GZMAP12544 262 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 PSMC3P17980 439 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 ATF6P18850 670 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 COX7A1P24310 79 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 GABRR2P28476 465 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 GTF2E2P29084 291 aaKnown RBP2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 FOXN2P32314 431 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 NSG1P42857 185 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 VDAC2P45880 294 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 CCNHP51946 323 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 UGT2B15P54855 530 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 DLX1P56177 255 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 RIPPLY3P57055 190 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 GPX6P59796 221 aa2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 YWHAGP61981 247 aaKnown RBP eCLIP2.36□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZNF763Q0D2J5 394 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms