RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SCGB3A2Q96PL1 93 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 KLK13Q9UKR3 277 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 DHDHQ9UQ10 334 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 CCL26Q9Y258 94 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 FAM96BQ9Y3D0 163 aa14.32□□□□□ -0.12
SCLT1-208ENST00000506368 CCL16O15467 120 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 ERCC1P07992 297 aaPredicted RBP14.31□□□□□ -0.12
SCLT1-208ENST00000506368 HOXC4P09017 264 aaPredicted RBP14.31□□□□□ -0.12
SCLT1-208ENST00000506368 LTBRP36941 435 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 RBM39Q14498 530 aaKnown RBP14.31□□□□□ -0.12
SCLT1-208ENST00000506368 TMEM225Q6GV28 225 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 KIRREL2Q6UWL6 708 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 DHRS11Q6UWP2 260 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 NECAB3Q96P71 396 aaPredicted RBP14.31□□□□□ -0.12
SCLT1-208ENST00000506368 PFDN5Q99471 154 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 MESP1Q9BRJ9 268 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 LAT2Q9GZY6 243 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 WSB2Q9NYS7 404 aaPredicted RBP14.31□□□□□ -0.12
SCLT1-208ENST00000506368 KCNG2Q9UJ96 466 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 SLC27A6Q9Y2P4 619 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 A0A0C4DFX4 3053 aa14.31□□□□□ -0.12
SCLT1-208ENST00000506368 TXNL1O43396 289 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 RENP00797 406 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 GAPDHP04406 335 aaKnown RBP14.3□□□□□ -0.12
SCLT1-208ENST00000506368 ZNF28P17035 718 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 IGFBP3P17936 291 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-208ENST00000506368 KIR3DL2P43630 455 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 SGCAQ16586 387 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 PRICKLE4Q2TBC4 344 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 TMEM128Q5BJH2 165 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 WDR38Q5JTN6 314 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 OR52W1Q6IF63 320 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 KDM8Q8N371 416 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 LILRB2Q8N423 598 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 RNF128Q8TEB7 428 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 CPNE2Q96FN4 548 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-208ENST00000506368 INTS14Q96SY0 518 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 NAA11Q9BSU3 229 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-208ENST00000506368 LMF2Q9BU23 707 aaKnown RBP14.3□□□□□ -0.12
SCLT1-208ENST00000506368 GGACTQ9BVM4 153 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 HCFC1R1Q9NWW0 138 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 CLEC1BQ9P126 229 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 HEBP2Q9Y5Z4 205 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 MYOFQ9NZM1 2061 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 LOC390937A0A1W2PQ73 354 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 NRG2O14511 850 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-208ENST00000506368 PPIHO43447 177 aaKnown RBP14.3□□□□□ -0.12
SCLT1-208ENST00000506368 MED6O75586 246 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 SLC34A2O95436 690 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 PNMTP11086 282 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 VAMP1P23763 118 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 ACKR3P25106 362 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 CD80P33681 288 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 ZNHIT3Q15649 155 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-208ENST00000506368 HNRNPA1L2Q32P51 320 aaKnown RBP14.3□□□□□ -0.12
SCLT1-208ENST00000506368 ITPRIPL2Q3MIP1 535 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 ACTBL2Q562R1 376 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 C1orf100Q5SVJ3 147 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 RHOUQ7L0Q8 258 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 KCTD9Q7L273 389 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 VN1R4Q7Z5H5 301 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 LRRC75AQ8NAA5 344 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 OR1J1Q8NGS3 322 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 OR10AC1Q8NH08 325 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 OIT3Q8WWZ8 545 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 OR8B4Q96RC9 309 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 NUDT9Q9BW91 350 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 SLC5A7Q9GZV3 580 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 KIR3DX1Q9H7L2 352 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 TM7SF3Q9NS93 570 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 PCOLCE2Q9UKZ9 415 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 RAB22AQ9UL26 194 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 MEMO1Q9Y316 297 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 NOTCH4Q99466 2003 aa14.3□□□□□ -0.12
SCLT1-208ENST00000506368 CEACAM18A8MTB9 384 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 CSTBP04080 98 aaKnown RBP14.29□□□□□ -0.12
SCLT1-208ENST00000506368 IFNA6P05013 189 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 EMDP50402 254 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 SLC29A4Q7RTT9 530 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 TAF8Q7Z7C8 310 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 ZNF614Q8N883 585 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 OR51A4Q8NGJ6 313 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 OR6N2Q8NGY6 317 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 OTOSQ8NHW6 89 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 CTHRC1Q96CG8 243 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 TM4SF19Q96DZ7 209 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 S100A13Q99584 98 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 HDAC8Q9BY41 377 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 RGCCQ9H4X1 137 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 TAF9BQ9HBM6 251 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 PRDM6Q9NQX0 595 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 CUTCQ9NTM9 273 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 TMED7Q9Y3B3 224 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 C13orf42A0A1B0GVH6 325 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 C7orf77A4D0Y5 90 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 GPR75O95800 540 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 CST4P01036 141 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 IFNA10P01566 189 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 SLC17A1Q14916 467 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 ZNF77Q15935 545 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms