RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 ZFPL1O95159 310 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 CNOT4O95628 575 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 TGM6O95932 706 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 CRHP06850 196 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 SFTPCP11686 197 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 PSKH1P11801 424 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 CALRP27797 417 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 SDC2P34741 201 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 TGFBR1P36897 503 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 RPS19P39019 145 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 OR3A2P47893 321 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 NANOS3P60323 173 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 PSMA6P60900 246 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 HIST1H3AP68431 136 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 DYNC1I2Q13409 638 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 ENDOGQ14249 297 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 RAB35Q15286 201 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 MOGQ16653 247 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 SLC36A2Q495M3 483 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 ACSF3Q4G176 576 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 HSD17B12Q53GQ0 312 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 HIST2H3PS2Q5TEC6 136 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 NSUN5P2Q63ZY6 315 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 UNQ9370/PRO34162Q6UXP9 181 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 HIST2H3AQ71DI3 136 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 SLC16A14Q7RTX9 510 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 LRRC18Q8N456 261 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 SLC22A24Q8N4F4 322 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 OR5M9Q8NGP3 310 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 TSEN15Q8WW01 171 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 TRMT61AQ96FX7 289 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 ZFP3Q96NJ6 502 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 KCNJ15Q99712 375 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 ATF6BQ99941 703 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 RNF167Q9H6Y7 350 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 HMG20AQ9NP66 347 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 SLC7A10Q9NS82 523 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 DDX28Q9NUL7 540 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 OR52A1Q9UKL2 312 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 HHLA2Q9UM44 414 aa10.59□□□□□ -0.71
POLR2J3-211ENST00000506060 GTF3C1Q12789 2109 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 K7EM74 188 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 RER1O15258 196 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 SGCEO43556 437 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 SC5DO75845 299 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 UCHL1P09936 223 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 OCM2P0CE71 109 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ABOP16442 354 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ZNF12P17014 697 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ACHEP22303 614 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 CTSSP25774 331 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 MPGP29372 298 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 NTF4P34130 210 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 PEX19P40855 299 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 PSMD7P51665 324 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 PER3P56645 1201 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 TGFBR3Q03167 851 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 MXD1Q05195 221 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 WDR38Q5JTN6 314 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ELFN2Q5R3F8 820 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 OTPQ5XKR4 325 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 FBXW9Q5XUX1 488 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 TMEM53Q6P2H8 277 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ZNF585AQ6P3V2 769 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 MZT2AQ6P582 158 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 CFAP77Q6ZQR2 320 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 FAM214BQ7L5A3 538 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ZNF627Q7L945 461 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 LUZP2Q86TE4 346 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 CCDC36Q8IYA8 594 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ZNF283Q8N7M2 679 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 CCDC54Q8NEL0 328 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 OR6K3Q8NGY3 331 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 TBC1D15Q8TC07 691 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ZFAND2BQ8WV99 257 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 NANOS1Q8WY41 292 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ACOT12Q8WYK0 555 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 SLIRPQ9GZT3 109 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 C6orf62Q9GZU0 229 aaPredicted RBP10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 NXF2Q9GZY0 626 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 TPK1Q9H3S4 243 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 TCF7L1Q9HCS4 588 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ZNF71Q9NQZ8 489 aaPredicted RBP10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 PLEK2Q9NYT0 353 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 MALT1Q9UDY8 824 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ATPIF1Q9UII2 106 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 SVILO95425 2214 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 ANKRD11Q6UB99 2663 aaPredicted RBP10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 CACNA1GO43497 2377 aa10.58□□□□□ -0.72
POLR2J3-211ENST00000506060 NCOA6Q14686 2063 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-211ENST00000506060 MED12LQ86YW9 2145 aa10.57□□□□□ -0.72
POLR2J3-211ENST00000506060 TRBV5-5A0A0J9YX44 114 aa10.57□□□□□ -0.72
POLR2J3-211ENST00000506060 IQCMA0A1B0GVH7 501 aa10.57□□□□□ -0.72
POLR2J3-211ENST00000506060 ISG15P05161 165 aa10.57□□□□□ -0.72
POLR2J3-211ENST00000506060 TPOP07202 933 aa10.57□□□□□ -0.72
POLR2J3-211ENST00000506060 B4GALT1P15291 398 aa10.57□□□□□ -0.72
POLR2J3-211ENST00000506060 RAB3BP20337 219 aa10.57□□□□□ -0.72
POLR2J3-211ENST00000506060 ARR3P36575 388 aa10.57□□□□□ -0.72
POLR2J3-211ENST00000506060 RANBP1P43487 201 aa10.57□□□□□ -0.72
POLR2J3-211ENST00000506060 KIR3DL2P43630 455 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms