RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 SDC4P31431 198 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 CD70P32970 193 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 SHMT2P34897 504 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 CSKP41240 450 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 AIF1P55008 147 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 UCNP55089 124 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 CDH4P55283 916 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 PRPS1P60891 318 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 RPS24P62847 133 aaKnown RBP2.2□□□□□ -2.06
RFC1-209ENST00000504974 CKAP4Q07065 602 aaKnown RBP2.2□□□□□ -2.06
RFC1-209ENST00000504974 MESDQ14696 234 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 CCDC14Q49A88 953 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 C1orf146Q5VVC0 180 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 TMEM215Q68D42 235 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 DNAJC24Q6P3W2 148 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 LRRC31Q6UY01 552 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 STRADAQ7RTN6 431 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 SETD3Q86TU7 594 aaPredicted RBP2.2□□□□□ -2.06
RFC1-209ENST00000504974 PHF13Q86YI8 300 aaPredicted RBP2.2□□□□□ -2.06
RFC1-209ENST00000504974 FTMTQ8N4E7 242 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 ZNF540Q8NDQ6 660 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 IPMKQ8NFU5 416 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 OR2T3Q8NH03 318 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 WFDC5Q8TCV5 224 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 C7orf33Q8WU49 177 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 NT5C3BQ969T7 300 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 NTAN1Q96AB6 310 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 TMEM101Q96IK0 257 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 RPRD1AQ96P16 312 aaPredicted RBP2.2□□□□□ -2.06
RFC1-209ENST00000504974 MCEEQ96PE7 176 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 NUP58Q9BVL2 599 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 RBKSQ9H477 322 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 PLGRKTQ9HBL7 147 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 ZDHHC4Q9NPG8 344 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 UFSP2Q9NUQ7 469 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 PTBP2Q9UKA9 531 aaKnown RBP2.2□□□□□ -2.06
RFC1-209ENST00000504974 VANGL2Q9ULK5 521 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 RASD1Q9Y272 281 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 MRPS7Q9Y2R9 242 aaKnown RBP2.2□□□□□ -2.06
RFC1-209ENST00000504974 V9GY05 133 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 MAP1AP78559 2803 aaPredicted RBP2.2□□□□□ -2.06
RFC1-209ENST00000504974 ABCA4P78363 2273 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 PLXNA2O75051 1894 aa2.2□□□□□ -2.06
RFC1-209ENST00000504974 RELNP78509 3460 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 ANKRD36A6QL64 1941 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 TRPM6Q9BX84 2022 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 A6NIZ1 184 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 SIGLEC16A6NMB1 481 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 TRIM49D1C9J1S8 452 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 ZNF861PO60384 105 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 UGT1A9O60656 530 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 ZNF780AO75290 641 aaPredicted RBP2.19□□□□□ -2.06
RFC1-209ENST00000504974 ATP5LO75964 103 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 DIRAS1O95057 198 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 STAMBPO95630 424 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 GYPCP04921 128 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 GIPP09681 153 aaPredicted RBP2.19□□□□□ -2.06
RFC1-209ENST00000504974 GZMAP12544 262 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 HTR1EP28566 365 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 OR1E1P30953 314 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 CALCRP30988 508 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 OTX2P32243 289 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 PSMD8P48556 350 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 TPMTP51580 245 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 ZNF133P52736 654 aaPredicted RBP2.19□□□□□ -2.06
RFC1-209ENST00000504974 TPI1P60174 286 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 RAP1BP61224 184 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 TGFBR3Q03167 851 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 ZNF33AQ06730 810 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 FGL1Q08830 312 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 GANABQ14697 944 aaKnown RBP2.19□□□□□ -2.06
RFC1-209ENST00000504974 CST6Q15828 149 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 IGFBP7Q16270 282 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 HNRNPA1L2Q32P51 320 aaKnown RBP2.19□□□□□ -2.06
RFC1-209ENST00000504974 KRTAP21-3Q3LHN1 58 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 DMRTC1Q5HYR2 192 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 SAMD4BQ5PRF9 694 aaKnown RBP2.19□□□□□ -2.06
RFC1-209ENST00000504974 C9orf64Q5T6V5 341 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 SPECC1LQ69YQ0 1117 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 C22orf39Q6P5X5 142 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 DCUN1D2Q6PH85 259 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 HSDL2Q6YN16 418 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 Q6ZN92 141 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 RNF165Q6ZSG1 346 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 PSTKQ8IV42 348 aaKnown RBP2.19□□□□□ -2.06
RFC1-209ENST00000504974 OR2L13Q8N349 312 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 RNF175Q8N4F7 328 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 C20orf203Q8NBC4 194 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 OR52K2Q8NGK3 314 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 JOSD2Q8TAC2 188 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 FAM172AQ8WUF8 416 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 DNAJA4Q8WW22 397 aaPredicted RBP2.19□□□□□ -2.06
RFC1-209ENST00000504974 HTR3CQ8WXA8 447 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 RXFP2Q8WXD0 754 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 CHCHD10Q8WYQ3 142 aaPredicted RBP2.19□□□□□ -2.06
RFC1-209ENST00000504974 OR8D1Q8WZ84 308 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 RDH5Q92781 318 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 UCN3Q969E3 161 aa2.19□□□□□ -2.06
RFC1-209ENST00000504974 TRIM44Q96DX7 344 aaPredicted RBP2.19□□□□□ -2.06
RFC1-209ENST00000504974 NAP1L5Q96NT1 182 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms