RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 TMEM185BQ9H7F4 350 aa3.19□□□□□ -1.9
TRAPPC13-206ENST00000504751 SAMSN1Q9NSI8 373 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-206ENST00000504751 ZNHIT6Q9NWK9 470 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-206ENST00000504751 V9GYY5 206 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC13-206ENST00000504751 NINLQ9Y2I6 1382 aa3.19□□□□□ -1.9
TRAPPC13-206ENST00000504751 TNIKQ9UKE5 1360 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 IGLV1-50A0A075B6I6 118 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 LYRM9A8MSI8 78 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 NDUFAB1O14561 156 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 LSM1O15116 133 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 SCAMP2O15127 329 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 NMT2O60551 498 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 FKBP6O75344 327 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 FLOT1O75955 427 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 SERPINE2P07093 398 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 RHOXF2BP0C7M4 288 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 STAG3L3P0CL85 134 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 CRISP1P54107 249 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 LOXL1Q08397 574 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 RCN1Q15293 331 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 SF3A2Q15428 464 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 NANOGP8Q6NSW7 305 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 RIMKLAQ8IXN7 391 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 OFCC1Q8IZS5 231 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 SPERTQ8NA61 448 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 MNS1Q8NEH6 495 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 NUBPLQ8TB37 319 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 NTAN1Q96AB6 310 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 CHP1Q99653 195 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 HMG20AQ9NP66 347 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 ZNF355PQ9NSJ1 428 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 ZNRD1Q9P1U0 126 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 ZNF282Q9UDV7 671 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 NOSIPQ9Y314 301 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 SLIT3O75094 1523 aa3.18□□□□□ -1.9
TRAPPC13-206ENST00000504751 POLR3GO15318 223 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 B4GALT5O43286 388 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 ZNF207O43670 478 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 EIF4E2O60573 245 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 CT45A6P0DMU7 189 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 CT45A5P0DMU8 189 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 CT45A7P0DMV0 189 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 TUBG1P23258 451 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 CCT6AP40227 531 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 CX3CR1P49238 355 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 RPS15P62841 145 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 SP4Q02446 784 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 IRF4Q15306 451 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 CT45A1Q5HYN5 189 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 SPANXN2Q5MJ10 180 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 UBE2UQ5VVX9 321 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 METTL21CQ5VZV1 264 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 TMEM205Q6UW68 189 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 SCD5Q86SK9 330 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 OR10AD1Q8NGE0 317 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 CT45A3Q8NHU0 189 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 C15orf40Q8WUR7 153 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 MCUR1Q96AQ8 359 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 ZNF707Q96C28 371 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 COL21A1Q96P44 957 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 MICU1Q9BPX6 476 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 SIRT7Q9NRC8 400 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 TUBG2Q9NRH3 451 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 CCDC59Q9P031 241 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 SLC17A4Q9Y2C5 497 aa3.17□□□□□ -1.9
TRAPPC13-206ENST00000504751 A0A075B6Q4 140 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 SPOPO43791 374 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 CDH16O75309 829 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 CLDN11O75508 207 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 GCM2O75603 506 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 AQP8O94778 261 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 S100A9P06702 114 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 WARSP23381 471 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 PMELP40967 661 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 STXBP1P61764 594 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 PRR3P79522 188 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 PGGHGQ32M88 737 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 HSDL1Q3SXM5 330 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 FBXO48Q5FWF7 155 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 TMCO2Q7Z6W1 182 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 LILRB4Q8NHJ6 448 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 NEURL3Q96EH8 262 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 DNAJC1Q96KC8 554 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 SIKE1Q9BRV8 207 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 STMN4Q9H169 189 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 SPNS1Q9H2V7 528 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 GEMIN7Q9H840 131 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 TMEM9BQ9NQ34 198 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 FAM49BQ9NUQ9 324 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 TMEM14AQ9Y6G1 99 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 ADAMTS13Q76LX8 1427 aa3.16□□□□□ -1.9
TRAPPC13-206ENST00000504751 TET2Q6N021 2002 aaPredicted RBP3.15□□□□□ -1.9
TRAPPC13-206ENST00000504751 A0A0U1RQV1 116 aa3.15□□□□□ -1.91
TRAPPC13-206ENST00000504751 A0A1B0GW55 424 aa3.15□□□□□ -1.91
TRAPPC13-206ENST00000504751 TMEM223A0PJW6 202 aa3.15□□□□□ -1.91
TRAPPC13-206ENST00000504751 SMKR1H3BMG3 65 aa3.15□□□□□ -1.91
TRAPPC13-206ENST00000504751 ARG1P05089 322 aa3.15□□□□□ -1.91
TRAPPC13-206ENST00000504751 UBTFL6P0CB48 400 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-206ENST00000504751 DUX4L2P0CJ85 424 aa3.15□□□□□ -1.91
TRAPPC13-206ENST00000504751 DUX4L3P0CJ86 424 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms