RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TCN1P20061 433 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ATP6V1B2P21281 511 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CMA1P23946 247 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 GABRR1P24046 479 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR1E1P30953 314 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 AQP2P41181 271 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 NBL1P41271 181 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 RANBP1P43487 201 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CSNK1A1P48729 337 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 EMP2P54851 167 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 BIDP55957 195 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR2B6P58173 313 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 UBE2G2P60604 165 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 SLC35B1P78383 322 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 SP4Q02446 784 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ECH1Q13011 328 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ITGB3BPQ13352 177 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR4D1Q15615 310 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 TNXAQ16473 311 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ATP6V1FQ16864 119 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 RGS21Q2M5E4 152 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CCDC14Q49A88 953 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CT45A1Q5HYN5 189 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 C1orf94Q6P1W5 598 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 UNQ9370/PRO34162Q6UXP9 181 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 MBOAT1Q6ZNC8 495 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 LINC00336Q6ZUF6 198 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACOT7LQ6ZUV0 252 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 PEX26Q7Z412 305 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 FAM220AQ7Z4H9 259 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 TMEM135Q86UB9 458 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF546Q86UE3 836 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CRLF3Q8IUI8 442 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CDKL3Q8IVW4 592 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 FTMTQ8N4E7 242 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 RNF10Q8N5U6 811 aaKnown RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF557Q8N988 423 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CYB561A3Q8NBI2 242 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 NOXO1Q8NFA2 376 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR2AP1Q8NGE2 309 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CT45A3Q8NHU0 189 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ITFG1Q8TB96 612 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 UBA3Q8TBC4 463 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 BAALCQ8WXS3 180 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 TFGQ92734 400 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 RPEQ96AT9 228 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CENPNQ96H22 339 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF514Q96K75 400 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZFP3Q96NJ6 502 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 SERPINB11Q96P15 392 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 PLEKHF1Q96S99 279 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 KLHDC3Q9BQ90 382 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 EBF4Q9BQW3 602 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF251Q9BRH9 671 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 C7orf50Q9BRJ6 194 aaKnown RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 UPF3BQ9BZI7 483 aaKnown RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACTR6Q9GZN1 396 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 SLC38A1Q9H2H9 487 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 C1orf198Q9H425 327 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 FOLH1BQ9HBA9 442 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 BEX1Q9HBH7 125 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 EML4Q9HC35 981 aaKnown RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 AGPAT4Q9NRZ5 378 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 EMC3Q9P0I2 261 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 MRM2Q9UI43 246 aaKnown RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CELA1Q9UNI1 258 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 RCL1Q9Y2P8 373 aaKnown RBP1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 PPIL1Q9Y3C6 166 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 URGCP-MRPS24S4R325 110 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 CNTNAP1P78357 1384 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 JCADQ9P266 1359 aa1.7□□□□□ -2.14
HMGB1P35-201ENST00000503360 USP42Q9H9J4 1324 aaKnown RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 IGKV6D-21A0A0A0MT36 114 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 A0A0G2JRQ6 117 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 A0A0J9YXY3 114 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 A0A1B0GW55 424 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 FABP12A6NFH5 140 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 F8VP50 259 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 SLC9A3R1O14745 358 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 MBTPS2O43462 519 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 FKBP6O75344 327 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 EIF3GO75821 320 aaKnown RBP eCLIP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 SC5DO75845 299 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 MMP23AO75900 390 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 ATP5HO75947 161 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUX4L2P0CJ85 424 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUX4L3P0CJ86 424 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUX4L5P0CJ88 424 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUX4L6P0CJ89 424 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 DUX4L7P0CJ90 424 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 RBMY1CP0DJD4 496 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 FUT3P21217 361 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 KDELR2P33947 212 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 GSSP48637 474 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 CDC34P49427 236 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 CAV2P51636 162 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 CCR8P51685 355 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 TAS2R60P59551 318 aa1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 STXBP1P61764 594 aaKnown RBP1.69□□□□□ -2.14
HMGB1P35-201ENST00000503360 TSPAN5P62079 268 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms