RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SFTPDP35247 375 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 UGT2B10P36537 528 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 LIPAP38571 399 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SERPINB10P48595 397 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 CCL11P51671 97 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 GBX2P52951 348 aaPredicted RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TAS2R43P59537 309 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ACTA2P62736 377 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ACTG2P63267 376 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 PLGLB1Q02325 96 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 BDH1Q02338 343 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 MRPL28Q13084 256 aaKnown RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 MFAP5Q13361 173 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TPBGQ13641 420 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 GALEQ14376 348 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TRAM1Q15629 374 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 NDUFA5Q16718 116 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 DGUOKQ16854 277 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 PRR30Q53SZ7 412 aaPredicted RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 MESTQ5EB52 335 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 EEF1A1P5Q5VTE0 462 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SPINK14Q6IE38 97 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 PAQR6Q6TCH4 344 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 PLEKHG7Q6ZR37 379 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 USP43Q70EL4 1123 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SHFQ7M4L6 423 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC16A9Q7RTY1 509 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 KCTD20Q7Z5Y7 419 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 YRDCQ86U90 279 aaKnown RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC35F2Q8IXU6 374 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TMEM99Q8N816 258 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TMEM178AQ8NBL3 297 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 BEND2Q8NDZ0 799 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 KBTBD8Q8NFY9 601 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 OR2M7Q8NG81 312 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 OR5M1Q8NGP8 315 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 OR6K6Q8NGW6 343 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TBC1D15Q8TC07 691 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 HAVCR2Q8TDQ0 301 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 CHAC2Q8WUX2 184 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SPRYD4Q8WW59 207 aaPredicted RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 S100ZQ8WXG8 99 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ASB10Q8WXI3 467 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 UFD1Q92890 307 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 GCDHQ92947 438 aaPredicted RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ZMYND19Q96E35 227 aaPredicted RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 DNAJA3Q96EY1 480 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 KLHL15Q96M94 604 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SFXN2Q96NB2 322 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 OPALINQ96PE5 141 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SIGLEC12Q96PQ1 595 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 GPHA2Q96T91 129 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 NPAS1Q99742 590 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 COQ7Q99807 217 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ALG12Q9BV10 488 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ALG8Q9BVK2 526 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 HCAR1Q9BXC0 346 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 OR2B2Q9GZK3 357 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 WDR12Q9GZL7 423 aaKnown RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 NAA50Q9GZZ1 169 aaKnown RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 RERGLQ9H628 205 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ADGRL4Q9HBW9 690 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TRIM36Q9NQ86 728 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TIGARQ9NQ88 270 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 BABAM2Q9NXR7 383 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 QPCTLQ9NXS2 382 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TAS2R16Q9NYV7 291 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 VSX1Q9NZR4 365 aaPredicted RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SSR3Q9UNL2 185 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 B9D1Q9UPM9 204 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 GSTK1Q9Y2Q3 226 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 PCNX3Q9H6A9 2034 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 LOC100506127A0A0U1RQW1 187 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 A0A1W2PPW3 197 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC22A23A1A5C7 686 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 UBE2QL1A1L167 161 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 AQP7P3A6NL99 342 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 J3QLW9 94 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 NME2P1O60361 137 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC16A7O60669 478 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 TMCC2O75069 709 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 KHDRBS3O75525 346 aaKnown RBP4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 SULT1C4O75897 302 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 CLPXO76031 633 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 F10P00742 488 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 HLA-DQA2P01906 255 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 OPN1LWP04000 364 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 HLA-DPB1P04440 258 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 HPNP05981 417 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 ADRA2AP08913 450 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 PRKAR1AP10644 381 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF823P16415 610 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF19P17023 458 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 CD53P19397 219 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 IL11P20809 199 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 ENPP1P22413 925 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 GADD45AP24522 165 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 PYCR1P32322 319 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 SOX6P35712 828 aa4.69□□□□□ -1.66
HMGXB4-208ENST00000498325 TGFBR2P37173 567 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms