RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 TMEM59Q9BXS4 323 aa1.36□□□□□ -2.19
VPS26A-208ENST00000497022 MFFQ9GZY8 342 aa1.36□□□□□ -2.19
VPS26A-208ENST00000497022 RACGAP1Q9H0H5 632 aa1.36□□□□□ -2.19
VPS26A-208ENST00000497022 MRPL47Q9HD33 250 aaKnown RBP1.36□□□□□ -2.19
VPS26A-208ENST00000497022 ADAP2Q9NPF8 381 aa1.36□□□□□ -2.19
VPS26A-208ENST00000497022 GPATCH2LQ9NWQ4 482 aa1.36□□□□□ -2.19
VPS26A-208ENST00000497022 LSM7Q9UK45 103 aaKnown RBP1.36□□□□□ -2.19
VPS26A-208ENST00000497022 TBC1D24Q9ULP9 559 aa1.36□□□□□ -2.19
VPS26A-208ENST00000497022 CHTOPQ9Y3Y2 248 aaKnown RBP1.36□□□□□ -2.19
VPS26A-208ENST00000497022 PHLPP2Q6ZVD8 1323 aa1.36□□□□□ -2.19
VPS26A-208ENST00000497022 CENPJQ9HC77 1338 aaPredicted RBP1.36□□□□□ -2.19
VPS26A-208ENST00000497022 SYNRGQ9UMZ2 1314 aa1.36□□□□□ -2.19
VPS26A-208ENST00000497022 MSH6P52701 1360 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 TRBV9A0A0B4J1U6 114 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 TRAV25A0A0B4J276 109 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 A0A1B0GTQ1 180 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 LRRIQ3A6PVS8 624 aaPredicted RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 SPECC1L-ADORA2AF8WAN1 911 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 SIRPB1O00241 398 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 CCL21O00585 134 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 DYNC1I1O14576 645 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 RAB29O14966 203 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 PPP1R2P9O14990 202 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 EIF3HO15372 352 aaKnown RBP eCLIP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 MGRN1O60291 552 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 ERLIN2O94905 339 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 GABARAPO95166 117 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 IGHV2-5P01817 119 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 BCHEP06276 602 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 ERCC1P07992 297 aaPredicted RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 EIF2S2P20042 333 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 TCN1P20061 433 aaPredicted RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 STOMP27105 288 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 DCKP27707 260 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 RORAP35398 523 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 CCT6AP40227 531 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 NAA10P41227 235 aaPredicted RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 MAGEA1P43355 309 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 GPR6P46095 362 aaPredicted RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 RPS5P46782 204 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 CSNK1A1P48729 337 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 TMED10P49755 219 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 CCNHP51946 323 aaPredicted RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 SUB1P53999 127 aaKnown RBP eCLIP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 LIPEQ05469 1076 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 SPAG1Q07617 926 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 MAB21L1Q13394 359 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 HADHQ16836 314 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 CAVIN4Q5BKX8 364 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 PIP5KL1Q5T9C9 394 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 C9orf135Q5VTT2 229 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 TMEM53Q6P2H8 277 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 CCDC73Q6ZRK6 1079 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 SLC16A14Q7RTX9 510 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 PDIK1LQ8N165 341 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 GABRG1Q8N1C3 465 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 ZNF557Q8N988 423 aaPredicted RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 FAM184AQ8NB25 1140 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 OR4A4PQ8NGN8 299 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 OR1S2Q8NGQ3 325 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 OR2G2Q8NGZ5 317 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 PIBF1Q8WXW3 757 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 ISG20Q96AZ6 181 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 CCDC126Q96EE4 140 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 NARS2Q96I59 477 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 SLC29A1Q99808 456 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 OSBPL10Q9BXB5 764 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 IQCGQ9H095 443 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 NEUROG2Q9H2A3 272 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 OR51M1Q9H341 326 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 MRPS30Q9NP92 439 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 FGF20Q9NP95 211 aaPredicted RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 ISYNA1Q9NPH2 558 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 RPRD1BQ9NQG5 326 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 LYARQ9NX58 379 aaKnown RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 PDP1Q9P0J1 537 aaPredicted RBP1.35□□□□□ -2.19
VPS26A-208ENST00000497022 PSG8Q9UQ74 426 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 C2orf16Q68DN1 1984 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 ZSWIM8A7E2V4 1837 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 SVILO95425 2214 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 TSPOAP1O95153 1857 aa1.35□□□□□ -2.19
VPS26A-208ENST00000497022 INSRP06213 1382 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 USP47Q96K76 1375 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 SORL1Q92673 2214 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 ARPC4-TTLL3A0A0A6YYG9 625 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 SMCO2A6NFE2 343 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 SUPT3HB4E1H0 165 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 GOLGA8TH3BQL2 631 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 CDC7O00311 574 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 NDUFAB1O14561 156 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 AIM2O14862 343 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 EEDO75530 441 aaKnown RBP1.34□□□□□ -2.19
VPS26A-208ENST00000497022 CCNE2O96020 404 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 FGGP02679 453 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 CCNB1P14635 433 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 SLC2A5P22732 501 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 GTF2E2P29084 291 aaKnown RBP1.34□□□□□ -2.19
VPS26A-208ENST00000497022 FOXN2P32314 431 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 SLC1A1P43005 524 aa1.34□□□□□ -2.19
VPS26A-208ENST00000497022 UQCRFS1P47985 274 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms