RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 LSM6P62312 80 aaKnown RBP12.09□□□□□ -0.47
VTI1A-209ENST00000496445 SPIBQ01892 262 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 MTX3Q5HYI7 312 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 SMARCD3Q6STE5 483 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 Q6ZR03 302 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 C1orf229Q6ZS94 237 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-209ENST00000496445 PGAM4Q8N0Y7 254 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 NPEPL1Q8NDH3 523 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 CCL17Q92583 94 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 PYURFQ96I23 114 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 TSSK2Q96PF2 358 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 RERGLQ9H628 205 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 ARL8BQ9NVJ2 186 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 PLEK2Q9NYT0 353 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 GRIP1Q9Y3R0 1128 aa12.09□□□□□ -0.47
VTI1A-209ENST00000496445 WNK2Q9Y3S1 2297 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 IGLV1-36A0A0B4J1U3 117 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 TRAV20A0A0B4J274 112 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 RER1O15258 196 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 PLPP2O43688 288 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 PNPP00491 289 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 AVPP01185 164 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 DBHP09172 617 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 GSTM3P21266 225 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 KITLGP21583 273 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 RPS6KA3P51812 740 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 CDK5R2Q13319 367 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 KRT72Q14CN4 511 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 KCNMB1Q16558 191 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 MEP1BQ16820 701 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 SAMD4BQ5PRF9 694 aaKnown RBP12.08□□□□□ -0.48
VTI1A-209ENST00000496445 ARL9Q6T311 187 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 CPLX4Q7Z7G2 160 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 OR1F12Q8NHA8 337 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 RAB39BQ96DA2 213 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 KRTAP3-2Q9BYR7 98 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 EGLN1Q9GZT9 426 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 OR52D1Q9H346 318 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 METTL17Q9H7H0 456 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-209ENST00000496445 KRCC1Q9NPI7 259 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-209ENST00000496445 PURGQ9UJV8 347 aaKnown RBP12.08□□□□□ -0.48
VTI1A-209ENST00000496445 ZDHHC8Q9ULC8 765 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 STARD10Q9Y365 291 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 LHFPL6Q9Y693 200 aa12.08□□□□□ -0.48
VTI1A-209ENST00000496445 GMNNO75496 209 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 GADD45GO95257 159 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 FABP3P05413 133 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 FPR3P25089 353 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 TNFAIP6P98066 277 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-209ENST00000496445 RFX4Q33E94 735 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 ZMAT1Q5H9K5 638 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 ACSM5Q6NUN0 579 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 C1orf94Q6P1W5 598 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 LEG1Q6P5S2 330 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 ZNF771Q7L3S4 317 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-209ENST00000496445 RAB1CQ92928 201 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 TIMD4Q96H15 378 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 NSMCE2Q96MF7 247 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 ERMAPQ96PL5 475 aaPredicted RBP12.07□□□□□ -0.48
VTI1A-209ENST00000496445 DIRC2Q96SL1 478 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 CDRT15Q96T59 188 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 TMPRSS13Q9BYE2 586 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 TAGLN3Q9UI15 199 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 ATPIF1Q9UII2 106 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 B9D1Q9UPM9 204 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 NBEAL1Q6ZS30 2694 aa12.07□□□□□ -0.48
VTI1A-209ENST00000496445 LOC105371242A0A075B767 164 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 ARPC3O15145 178 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 OR10H3O60404 316 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 IGHV2-70P01814 119 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 HIST1H1CP16403 213 aaKnown RBP12.06□□□□□ -0.48
VTI1A-209ENST00000496445 RRM2P31350 389 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 SLC6A6P31641 620 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 GSSP48637 474 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 GNGT1P63211 74 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 LIPNQ5VXI9 398 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 FAHD2BQ6P2I3 314 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-209ENST00000496445 ZNF620Q6ZNG0 422 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 PIGWQ7Z7B1 504 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.06□□□□□ -0.48
VTI1A-209ENST00000496445 OR6V1Q8N148 313 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 SEMA6DQ8NFY4 1073 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 CMBLQ96DG6 245 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 FAHD2AQ96GK7 314 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 SAMD8Q96LT4 415 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 NMNAT3Q96T66 252 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 GAL3ST1Q99999 423 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 POLR1DQ9Y2S0 133 aa12.06□□□□□ -0.48
VTI1A-209ENST00000496445 A0A0G2JMP0 313 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 A0A0X1KG70 313 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 ISPDA4D126 451 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 J3QW42 95 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 VENTXO95231 258 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 ANPEPP15144 967 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 ATP6V1B2P21281 511 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 TUBG1P23258 451 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms