RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-223	ENST00000496296	C19orf57	Q0VDD7	668 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	SRSF6	Q13247	344 aa	Known RBP	18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	MFAP5	Q13361	173 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	MELK	Q14680	651 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	SLC35D2	Q76EJ3	337 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	YRDC	Q86U90	279 aa	Known RBP	18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	CDH24	Q86UP0	819 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	NOXA1	Q86UR1	476 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	UEVLD	Q8IX04	471 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	C15orf40	Q8WUR7	153 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	KCNK17	Q96T54	332 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	LIN7B	Q9HAP6	207 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296	KLHL13	Q9P2N7	655 aa		18.83	■□□□□ 0.6
FGFR1-223	ENST00000496296		A0A1B0GTH9	108 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	EIF1B	O60739	113 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	MRPS15	P82914	257 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	FOXO1	Q12778	655 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	NHLRC1	Q6VVB1	395 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	LRRC69	Q6ZNQ3	347 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	SIAH3	Q8IW03	269 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	SULF2	Q8IWU5	870 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	ZNF433	Q8N7K0	673 aa	Predicted RBP	18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	HAVCR1	Q96D42	359 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	SFXN2	Q96NB2	322 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	PINLYP	A6NC86	204 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296		A8MV72	311 aa	Predicted RBP	18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	KLRC4-KLRK1	H3BQV0	150 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	GABARAP	H6UMI1	98 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	HLA-DQA2	P01906	255 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	ADRB1	P08588	477 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	CD3G	P09693	182 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	CD46	P15529	392 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	RCVRN	P35243	200 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	RPS27	P42677	84 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	ARG2	P78540	354 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	ZNF239	Q16600	458 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	SLC25A25	Q6KCM7	469 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	DNM1P46	Q6ZS02	220 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	ESPNL	Q6ZVH7	1005 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	FCRLA	Q7L513	359 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	SCMH1	Q96GD3	660 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	ZFP3	Q96NJ6	502 aa		18.82	■□□□□ 0.6
FGFR1-223	ENST00000496296	AQP7P3	A6NL99	342 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	LINC01387	J3KSC0	135 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	SRSF10	O75494	262 aa	Known RBP	18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	HRG	P04196	525 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	SP1	P08047	785 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	CD37	P11049	281 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	B3GALT5-AS1	P59052	145 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	HDDC2	Q7Z4H3	204 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	GPAT4	Q86UL3	456 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	SLC26A10	Q8NG04	563 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	OR10AC1	Q8NH08	325 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	OR52N5	Q8NH56	324 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	AKAP1	Q92667	903 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	TMEM106A	Q96A25	262 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	OXGR1	Q96P68	337 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	FYTTD1	Q96QD9	318 aa	Known RBP	18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	NAA11	Q9BSU3	229 aa	Predicted RBP	18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	ABHD6	Q9BV23	337 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	NIPAL2	Q9H841	368 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	ING1	Q9UK53	422 aa	Predicted RBP	18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	CLEC4A	Q9UMR7	237 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	FOXJ3	Q9UPW0	622 aa		18.81	■□□□□ 0.6
FGFR1-223	ENST00000496296	TRAV8-7	A0A075B6U6	113 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	NME2P1	O60361	137 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	AQP8	O94778	261 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	DHFR	P00374	187 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	SPARC	P09486	303 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	NME2	P22392	152 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	SOX2	P48431	317 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	PTH2R	P49190	550 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	SRP9	P49458	86 aa	Known RBP	18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	ADAM8	P78325	824 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	ETFDH	Q16134	617 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	WIPI1	Q5MNZ9	446 aa	Predicted RBP	18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	DEGS2	Q6QHC5	323 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	KRT74	Q7RTS7	529 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	CATSPERD	Q86XM0	798 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	SLC7A5P1	Q8MH63	180 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	ASCC1	Q8N9N2	400 aa	Known RBP	18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	MDS2	Q8NDY4	140 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	HAS2	Q92819	552 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	S100A16	Q96FQ6	103 aa	Known RBP	18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	DMRTB1	Q96MA1	342 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	ZNF552	Q9H707	407 aa	Predicted RBP	18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	ECD	O95905	644 aa	Predicted RBP	18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	TCRB	P04435	133 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	CCL11	P51671	97 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	RIDA	P52758	137 aa	Known RBP	18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	ART1	P52961	327 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	SMAD5	Q99717	465 aa	Known RBP	18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	HES7	Q9BYE0	225 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	SLA2	Q9H6Q3	261 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	B3GAT1	Q9P2W7	334 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	STEAP1	Q9UHE8	339 aa		18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	COA3	Q9Y2R0	106 aa	Predicted RBP	18.8	■□□□□ 0.6
FGFR1-223	ENST00000496296	LOC102725191	A0A1B0GVB3	256 aa		18.79	■□□□□ 0.6
FGFR1-223	ENST00000496296	ZNF43	P17038	809 aa		18.79	■□□□□ 0.6
FGFR1-223	ENST00000496296	WT1	P19544	449 aa	Predicted RBP	18.79	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms