RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 GADD45GO95257 159 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 DBHP09172 617 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 SDHAP31040 664 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 LIMS1P48059 325 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 RPS6KA3P51812 740 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 SPIBQ01892 262 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 SCRN3Q0VDG4 424 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 MEP1BQ16820 701 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 C4orf46Q504U0 113 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 CCDC92Q53HC0 331 aaPredicted RBP8.14□□□□□ -1.11
MSH5-218ENST00000494646 LIPNQ5VXI9 398 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 GPR139Q6DWJ6 353 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 ACSM5Q6NUN0 579 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 DPY19L2P2Q6ZN68 376 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 VASH1Q7L8A9 365 aaPredicted RBP8.14□□□□□ -1.11
MSH5-218ENST00000494646 OR51F2Q8NH61 342 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 RAB1CQ92928 201 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 NDEL1Q9GZM8 345 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 EGLN1Q9GZT9 426 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 NSRP1Q9H0G5 558 aaKnown RBP8.14□□□□□ -1.11
MSH5-218ENST00000494646 CYSLTR2Q9NS75 346 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 DCAF16Q9NXF7 216 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 UBAP1Q9NZ09 502 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 VSX1Q9NZR4 365 aaPredicted RBP8.14□□□□□ -1.11
MSH5-218ENST00000494646 ASH2LQ9UBL3 628 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 NDRG4Q9ULP0 352 aaKnown RBP8.14□□□□□ -1.11
MSH5-218ENST00000494646 B9D1Q9UPM9 204 aa8.14□□□□□ -1.11
MSH5-218ENST00000494646 CMYA5Q8N3K9 4069 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 RER1O15258 196 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 TCF21O43680 179 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 OR10H3O60404 316 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 UBOX5O94941 541 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 AVPP01185 164 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 SBK2P0C263 348 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 COX5BP10606 129 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 ANPEPP15144 967 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 ITGA2P17301 1181 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 PCMT1P22061 227 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 LIPAP38571 399 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 ERFP50548 548 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 MMP16P51512 607 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 GNGT1P63211 74 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 MXRA7P84157 204 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 TNFAIP6P98066 277 aaPredicted RBP8.13□□□□□ -1.11
MSH5-218ENST00000494646 CDK5R2Q13319 367 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 RFX4Q33E94 735 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 MTX3Q5HYI7 312 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 FAM209AQ5JX71 171 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 LEG1Q6P5S2 330 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 CORO6Q6QEF8 472 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 SMARCD3Q6STE5 483 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 C1orf229Q6ZS94 237 aaPredicted RBP8.13□□□□□ -1.11
MSH5-218ENST00000494646 GLB1L2Q8IW92 636 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 C1orf174Q8IYL3 243 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 OR5AS1Q8N127 324 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 RFLNBQ8N5W9 214 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 OR2Z1Q8NG97 314 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 OR4K13Q8NH42 304 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 OR1F12Q8NHA8 337 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 PTP4A1Q93096 173 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 MCUR1Q96AQ8 359 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 TIMD4Q96H15 378 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 SAMD8Q96LT4 415 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 NSMCE2Q96MF7 247 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 NMNAT3Q96T66 252 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 FUZQ9BT04 418 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 WACQ9BTA9 647 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 OR52D1Q9H346 318 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 TBCCD1Q9NVR7 557 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 PTTG3PQ9NZH4 202 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 CD300AQ9UGN4 299 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 PURGQ9UJV8 347 aaKnown RBP8.13□□□□□ -1.11
MSH5-218ENST00000494646 ZDHHC8Q9ULC8 765 aa8.13□□□□□ -1.11
MSH5-218ENST00000494646 LOC105371242A0A075B767 164 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 TRAV20A0A0B4J274 112 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 ARPC2O15144 300 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 DEAF1O75398 565 aaPredicted RBP8.12□□□□□ -1.11
MSH5-218ENST00000494646 VENTXO95231 258 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 TXNDC12O95881 172 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 IGHV2-5P01817 119 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 SEMG1P04279 462 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 FABP3P05413 133 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 HSD17B1P14061 328 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 HIST1H1CP16403 213 aaKnown RBP8.12□□□□□ -1.11
MSH5-218ENST00000494646 ADRA2CP18825 462 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 ATF4P18848 351 aaPredicted RBP8.12□□□□□ -1.11
MSH5-218ENST00000494646 RRM2P31350 389 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 SMIM11AP58511 58 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 LSM6P62312 80 aaKnown RBP8.12□□□□□ -1.11
MSH5-218ENST00000494646 LCN2P80188 198 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 PPP1R8Q12972 351 aaKnown RBP8.12□□□□□ -1.11
MSH5-218ENST00000494646 AQP6Q13520 282 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 HLXQ14774 488 aaPredicted RBP8.12□□□□□ -1.11
MSH5-218ENST00000494646 SAMD4BQ5PRF9 694 aaKnown RBP8.12□□□□□ -1.11
MSH5-218ENST00000494646 SLC35F1Q5T1Q4 408 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 OR2T2Q6IF00 324 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 SHQ1Q6PI26 577 aaKnown RBP8.12□□□□□ -1.11
MSH5-218ENST00000494646 CYP2R1Q6VVX0 501 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 Q6ZR03 302 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 PIGWQ7Z7B1 504 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms