RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 RAB8AP61006 207 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 SRSF6Q13247 344 aaKnown RBP5.6□□□□□ -1.51
SNX13-210ENST00000494402 SPA17Q15506 151 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 YIF1BQ5BJH7 314 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 GPRC6AQ5T6X5 926 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 ZNF57Q68EA5 555 aaPredicted RBP5.6□□□□□ -1.51
SNX13-210ENST00000494402 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 MED27Q6P2C8 311 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 CREB3L2Q70SY1 520 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 GDPD3Q7L5L3 318 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 CALHM1Q8IU99 346 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 PUSL1Q8N0Z8 303 aaKnown RBP5.6□□□□□ -1.51
SNX13-210ENST00000494402 NANOGP1Q8N7R0 232 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 OR52B6Q8NGF0 335 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 FAM172AQ8WUF8 416 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 FGF11Q92914 225 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 UBXN6Q9BZV1 441 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 WDR41Q9HAD4 459 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 BATF3Q9NR55 127 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 EXD2Q9NVH0 621 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 VNN3Q9NY84 501 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 IL17CQ9P0M4 197 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 RIMS3Q9UJD0 308 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 MMP17Q9ULZ9 603 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 SPATA2Q9UM82 520 aa5.6□□□□□ -1.51
SNX13-210ENST00000494402 IGLV3-22A0A075B6J6 115 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 TRBV5-4A0A0C4DH59 114 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 A0A1B0GWB2 263 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 GNG14A0A1W2PPG7 69 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 ERVV-1B6SEH8 477 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 ACOT8O14734 319 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 CDIPTO14735 213 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 PFDN6O15212 129 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 PHF1O43189 567 aaPredicted RBP5.59□□□□□ -1.51
SNX13-210ENST00000494402 RAD51CO43502 376 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 FRAT2O75474 233 aaPredicted RBP5.59□□□□□ -1.51
SNX13-210ENST00000494402 LALBAP00709 142 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 SERPINA1P01009 418 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 RLN2P04090 185 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 HOXC4P09017 264 aaPredicted RBP5.59□□□□□ -1.51
SNX13-210ENST00000494402 SNRPCP09234 159 aaKnown RBP5.59□□□□□ -1.51
SNX13-210ENST00000494402 GNAO1P09471 354 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 UGT2B7P16662 529 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 MPGP29372 298 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 TGFBR2P37173 567 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 CD79BP40259 229 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 OMPP47874 163 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 MNAT1P51948 309 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 TGFBR3Q03167 851 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 CD164Q04900 197 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 PUDPQ08623 228 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 NECTIN1Q15223 517 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 TRAM1Q15629 374 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 PARP15Q460N3 678 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 CCNJQ5T5M9 372 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 PWWP2BQ6NUJ5 590 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 CCDC71Q8IV32 467 aaPredicted RBP5.59□□□□□ -1.51
SNX13-210ENST00000494402 OR8G5Q8NG78 346 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 OR2T11Q8NH01 316 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 PRSS3P2Q8NHM4 247 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 MAPK15Q8TD08 544 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 TMED6Q8WW62 240 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 SLC35B4Q969S0 331 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 CREB3L1Q96BA8 519 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 SMIM19Q96E16 107 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 DYNLL2Q96FJ2 89 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 ZNF488Q96MN9 340 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 KCTD7Q96MP8 289 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 Q96MT0 163 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 ATF6BQ99941 703 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 SH3GL3Q99963 347 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 CHIAQ9BZP6 476 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 EBF2Q9HAK2 575 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 FBXO6Q9NRD1 293 aaPredicted RBP5.59□□□□□ -1.51
SNX13-210ENST00000494402 ARL2BPQ9Y2Y0 163 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 CACNG2Q9Y698 323 aa5.59□□□□□ -1.51
SNX13-210ENST00000494402 KIR2DL5BA0A0G2JN68 375 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 KIR2DL5BA0A0G2JPC4 375 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 ZNF816-ZNF321PA0A0X1KG74 233 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 ZNF233A6NK53 670 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 C21orf140B9A014 251 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 NME4O00746 187 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 BIRC5O15392 142 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 MBTPS2O43462 519 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 ICOSLGO75144 302 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 EIF3GO75821 320 aaKnown RBP eCLIP5.58□□□□□ -1.52
SNX13-210ENST00000494402 GLSO94925 669 aaPredicted RBP5.58□□□□□ -1.52
SNX13-210ENST00000494402 NGFP01138 241 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 KLK3P07288 261 aaPredicted RBP5.58□□□□□ -1.52
SNX13-210ENST00000494402 PRSS2P07478 247 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 THRAP10827 490 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 IGFBP5P24593 272 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 ALDH3A1P30838 453 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 RPA3P35244 121 aaPredicted RBP5.58□□□□□ -1.52
SNX13-210ENST00000494402 MAGEA12P43365 314 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 SUB1P53999 127 aaKnown RBP eCLIP5.58□□□□□ -1.52
SNX13-210ENST00000494402 AQP5P55064 265 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 OR4D2P58180 307 aa5.58□□□□□ -1.52
SNX13-210ENST00000494402 ERVK-16P61578 105 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms