RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 MTFP1Q9UDX5 166 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 WARS2Q9UGM6 360 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF469Q96JG9 3925 aaPredicted RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MYOFQ9NZM1 2061 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 A0A1W2PRV1 198 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM210A6NLX4 147 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRRG1O14668 218 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PHYHO14832 338 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 RRP8O43159 456 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 USP12O75317 370 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MMP23AO75900 390 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC25A27O95847 323 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 IFNB1P01574 187 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 APOC1P02654 83 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 KRT8P05787 483 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 C8GP07360 202 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 COX5BP10606 129 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TNNI1P19237 187 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 STOMP27105 288 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TIA1P31483 386 aaKnown RBP eCLIP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 AVPR1AP37288 418 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRLHRP49683 370 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC25A1P53007 311 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CRYBB1P53674 252 aaPredicted RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC37A1P57057 533 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 LSM6P62312 80 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MRPS11P82912 194 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 EIF4EBP1Q13541 118 aaPredicted RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SNTB1Q13884 538 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 KRT33BQ14525 404 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PDLIM3Q53GG5 364 aaPredicted RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 FBXO48Q5FWF7 155 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 FBXW9Q5XUX1 488 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMIGD1Q6UXZ0 262 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 AHSA2Q719I0 299 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ERN2Q76MJ5 926 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC25A42Q86VD7 318 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 AMIGO1Q86WK6 493 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CDC20BQ86Y33 519 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 C20orf196Q8IYI0 205 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CFAP206Q8IYR0 622 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SPAG16Q8N0X2 631 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 NAGSQ8N159 534 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SIDT2Q8NBJ9 832 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR4K14Q8NGD5 310 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 LRRC20Q8TCA0 184 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SMAP2Q8WU79 429 aaPredicted RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MYLPFQ96A32 169 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM230Q96A57 120 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MIB2Q96AX9 1013 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TSSK3Q96PN8 268 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 DERL3Q96Q80 235 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 GINS3Q9BRX5 216 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PINK1Q9BXM7 581 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PIGMQ9H3S5 423 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM27Q9HBJ8 222 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PARP11Q9NR21 331 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MARCH5Q9NX47 278 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SCN3BQ9NY72 215 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF581Q9P0T4 197 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC25A10Q9UBX3 287 aaPredicted RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MALT1Q9UDY8 824 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF391Q9UJN7 358 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CLEC4AQ9UMR7 237 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 DSCAML1Q8TD84 2053 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 A4D1N5 150 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CXorf65A6NEN9 183 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ANTXRLA6NF34 631 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR6C70A6NIJ9 312 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC9B1P1A6NJY1 282 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 E9PI62 339 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 KCNK1O00180 336 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 WWP2O00308 870 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR2F2O95006 317 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TFP02787 698 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 FHP07954 510 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ANXA7P20073 488 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACKR3P25106 362 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 HTR2AP28223 471 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 S100A11P31949 105 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACVR1BP36896 505 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 RBM34P42696 430 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 POU3F4P49335 361 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 KHKP50053 298 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 P2RX1P51575 399 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CCR8P51685 355 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 YPEL3P61236 119 aaPredicted RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SUPT4H1P63272 117 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRKCZQ05513 592 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CRYZQ08257 329 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR2F1Q13607 317 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CBFBQ13951 182 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 IFI44LQ53G44 452 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CCDC144NLQ6NUI1 221 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACSM6Q6P461 480 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ARHGAP11AQ6P4F7 1023 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SPESP1Q6UW49 350 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC36A4Q6YBV0 504 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MBOAT2Q6ZWT7 520 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ABHD13Q7L211 337 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms