RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 LOXP28300 417 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 IL12AP29459 219 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 IL12BP29460 328 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 GABRA5P31644 462 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 GABRA3P34903 492 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 EVI2BP34910 448 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 DEKP35659 375 aaKnown RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 MNDAP41218 407 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SLC15A1P46059 708 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SERPINB9P50453 376 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 LHX2P50458 406 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 CCR4P51679 360 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 MRPS22P82650 360 aaKnown RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 HOXC5Q00444 222 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 CAV1Q03135 178 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF117Q03924 483 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 RBPJQ06330 500 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 TGM3Q08188 693 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF763Q0D2J5 394 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 LCP2Q13094 533 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 CUL3Q13618 768 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SERTAD2Q14140 314 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 LASP1Q14847 261 aaKnown RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SLC10A1Q14973 349 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 KIAA0040Q15053 153 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 CHI3L2Q15782 390 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 MAPK14Q16539 360 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 IMPG1Q17R60 797 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 TIGD3Q6B0B8 471 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 NOXRED1Q6NXP6 359 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 PLBD1Q6P4A8 553 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 TNFAIP8L2Q6P589 184 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 OPN5Q6U736 354 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ENPP6Q6UWR7 440 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF841Q6ZN19 808 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 TMPRSS11FQ6ZWK6 438 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 NUFIP2Q7Z417 695 aaKnown RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SLC22A16Q86VW1 577 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 IFNEQ86WN2 208 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 MEX3DQ86XN8 651 aaKnown RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 FAM9CQ8IZT9 166 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SLC34A3Q8N130 599 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 TMCO5AQ8N6Q1 288 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 Q8N7P7 452 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 BANPQ8N9N5 519 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ACBD4Q8NC06 268 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 TTLQ8NG68 377 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 OR1J4Q8NGS1 313 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 LILRB4Q8NHJ6 448 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 KIF18AQ8NI77 898 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 NUBPLQ8TB37 319 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 RAB3IL1Q8TBN0 382 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 TCP10LQ8TDR4 215 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 GPR151Q8TDV0 419 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 GPR119Q8TDV5 335 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 NPRL2Q8WTW4 380 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ABHD3Q8WU67 409 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 PHF10Q8WUB8 498 aaKnown RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ANP32BQ92688 251 aaKnown RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 NTNG2Q96CW9 530 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SAT2Q96F10 170 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 PIK3IP1Q96FE7 263 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 RBM18Q96H35 190 aaKnown RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 RNF145Q96MT1 663 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 AMDHD1Q96NU7 426 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ZIM3Q96PE6 472 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 RAB3IPQ96QF0 476 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SORT1Q99523 831 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF559Q9BR84 538 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ANGPTL4Q9BY76 406 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 HRH4Q9H3N8 390 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 WDR55Q9H6Y2 383 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 COQ10BQ9H8M1 238 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 LRTM1Q9HBL6 345 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 MCCC2Q9HCC0 563 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 MYNNQ9NPC7 610 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 MIEF1Q9NQG6 463 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 ABCB10Q9NRK6 738 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SENP1Q9P0U3 644 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 VPS29Q9UBQ0 182 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 SEC14L4Q9UDX3 406 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 PRODH2Q9UF12 536 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 BOKQ9UMX3 212 aaPredicted RBP2.44□□□□□ -2.02
PTCD3-218ENST00000493430 OR10H1Q9Y4A9 318 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 DNAJC15Q9Y5T4 150 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 IKBKGQ9Y6K9 419 aa2.44□□□□□ -2.02
PTCD3-218ENST00000493430 LOC100509620A0A075B734 347 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 A0A1W2PNV4 684 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 hCG_1809904A0A1W2PP81 198 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 A0A1W2PPE2 198 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 A0A1W2PR64 198 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 FRG2CA6NGY1 282 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 LRRN3E7EW58 273 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 FOXE1O00358 373 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 SDHDO14521 159 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 CTDSP2O14595 271 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 SCAMP2O15127 329 aaKnown RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 TYROBPO43914 113 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 FADS1O60427 444 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 KLHL41O60662 606 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms