RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 MAS1P04201 325 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 SPARCP09486 303 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 HLA-DOBP13765 273 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 ZP3P21754 424 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 PTAFRP25105 342 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 SLC6A8P48029 635 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 DCAF7P61962 342 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 RELQ04864 619 aaPredicted RBP6.28□□□□□ -1.4
HERC4-211ENST00000492996 CBFBQ13951 182 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 SSX2Q16385 188 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 NTRK2Q16620 822 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 BCL2L15Q5TBC7 163 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 FCRLAQ7L513 359 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 CMTM4Q8IZR5 234 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 OR5AK2Q8NH90 309 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 MRPL48Q96GC5 212 aaKnown RBP6.28□□□□□ -1.4
HERC4-211ENST00000492996 SCMH1Q96GD3 660 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 CCDC74BQ96LY2 380 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 OR10A4Q9H209 315 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 CDCP1Q9H5V8 836 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 AUNIPQ9H7T9 357 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 NUDT15Q9NV35 164 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 SDHAF2Q9NX18 166 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 FRRS1LQ9P0K9 344 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 IL17BQ9UHF5 180 aa6.28□□□□□ -1.4
HERC4-211ENST00000492996 NCOA6Q14686 2063 aaPredicted RBP6.28□□□□□ -1.4
HERC4-211ENST00000492996 TRAV1-2A0A0B4J238 106 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 METTL21EPA6NDL7 271 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 WRBO00258 174 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 SLC43A1O75387 559 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 SCRG1O75711 98 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 RAF1P04049 648 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 CBR1P16152 277 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 IGFBP2P18065 325 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 RAB13P51153 203 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 CCR6P51684 374 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 PNLIPRP2P54317 469 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 BPIFB3P59826 476 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 IL10RAQ13651 578 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 PHF19Q5T6S3 580 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 C1orf140Q5VVS0 124 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 PAPD4Q6PIY7 484 aaKnown RBP6.27□□□□□ -1.4
HERC4-211ENST00000492996 FAM198BQ6UWH4 519 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 LINGO2Q7L985 606 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 SSX9Q7RTT3 188 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 MDGA2Q7Z553 956 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 KRT77Q7Z794 578 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 SIAH3Q8IW03 269 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 TOMM5Q8N4H5 51 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 INTS14Q96SY0 518 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 GFI1Q99684 422 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 CRB3Q9BUF7 120 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 SMOC1Q9H4F8 434 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 ESRP2Q9H6T0 727 aaKnown RBP6.27□□□□□ -1.4
HERC4-211ENST00000492996 LDAHQ9H6V9 325 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 TMEM185BQ9H7F4 350 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 TCF7L1Q9HCS4 588 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 PLSCR2Q9NRY7 297 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 UFSP2Q9NUQ7 469 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 SLCO1C1Q9NYB5 712 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 COA4Q9NYJ1 87 aa6.27□□□□□ -1.4
HERC4-211ENST00000492996 ELF5Q9UKW6 265 aaPredicted RBP6.27□□□□□ -1.4
HERC4-211ENST00000492996 TRBV11-1A0A0K0K1C0 115 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 hCG_1807616A0A1W2PRN6 198 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 ZNF593O00488 134 aaPredicted RBP6.27□□□□□ -1.41
HERC4-211ENST00000492996 ORC5O43913 435 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 UPK3AO75631 287 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 GATBO75879 557 aaKnown RBP6.27□□□□□ -1.41
HERC4-211ENST00000492996 MPZL1O95297 269 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 AHSA1O95433 338 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 LY86O95711 162 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 MT-ND4P03905 459 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 HRGP04196 525 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 TACSTD2P09758 323 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 FAM157BP0CG42 384 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 ARSBP15848 533 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 CTLA4P16410 223 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 GIFP27352 417 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 P2RX1P51575 399 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 SLC25A1P53007 311 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 CASP6P55212 293 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 ALKBH1Q13686 389 aaKnown RBP6.27□□□□□ -1.41
HERC4-211ENST00000492996 INPP5JQ15735 1006 aaPredicted RBP6.27□□□□□ -1.41
HERC4-211ENST00000492996 DCAF12Q5T6F0 453 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 FAM69AQ5T7M9 428 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 ABHD17BQ5VST6 288 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 Q6ZS92 163 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 APCDD1LQ8NCL9 501 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 DUSP18Q8NEJ0 188 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 BEST4Q8NFU0 473 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 OR6S1Q8NH40 331 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 RNF166Q96A37 237 aaPredicted RBP6.27□□□□□ -1.41
HERC4-211ENST00000492996 PTDSS2Q9BVG9 487 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 AKAP7Q9P0M2 348 aaPredicted RBP6.27□□□□□ -1.41
HERC4-211ENST00000492996 MIOXQ9UGB7 285 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 SLC22A13Q9Y226 551 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 CBY1Q9Y3M2 126 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 WDFY3Q8IZQ1 3526 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 A0A1B0GV90 55 aa6.27□□□□□ -1.41
HERC4-211ENST00000492996 POM121CA8CG34 1229 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms