RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 CLDN22Q8N7P3 220 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 BHLHE23Q8NDY6 225 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PAQR8Q8TEZ7 354 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 FCAMRQ8WWV6 532 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SGCDQ92629 289 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 RND1Q92730 232 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 HAS2Q92819 552 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ARL11Q969Q4 196 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CPNE4Q96A23 557 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TXNDC15Q96J42 360 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 OR51J1Q9H342 316 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 NIT2Q9NQR4 276 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 A4GNTQ9UNA3 340 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 STUB1Q9UNE7 303 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 EXOSC1Q9Y3B2 195 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TRBV5-3A0A0A0MS03 114 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 A0A0B4J2E0 115 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 A0A0G2JMP0 313 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 A0A1B0GX12 115 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CDRT15L2A8MXV6 281 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 E9PI62 339 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TOR1AO14656 332 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TM4SF5O14894 197 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF254O75437 659 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TFP02787 698 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CAPNS1P04632 268 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TACSTD2P09758 323 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 HIST1H1CP16403 213 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 MAP3K8P41279 467 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 MTNR1AP48039 350 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 MVDP53602 400 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 HCCSP53701 268 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 IGLV3-21P80748 117 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 FMODQ06828 376 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 BATFQ16520 125 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 MEP1BQ16820 701 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 MEDAGQ5VYS4 303 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 FAM205BPQ63HN1 556 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 STEAP3Q658P3 488 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF385CQ66K41 422 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ABHD12BQ7Z5M8 362 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 KLBQ86Z14 1044 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 OR4M2Q8NGB6 313 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SPRYD4Q8WW59 207 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SCGB3A2Q96PL1 93 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 HDHD5Q9BXW7 423 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 MFFQ9GZY8 342 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 OR10A4Q9H209 315 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 WDR76Q9H967 626 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 MRPL15Q9P015 296 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SEMA5BQ9P283 1151 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF223Q9UK11 482 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 KCNIP3Q9Y2W7 256 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 HDGFL3Q9Y3E1 203 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CEP192Q8TEP8 1941 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 SLC22A31A6NKX4 558 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 M0R1B8 84 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF593O00488 134 aaPredicted RBP4.01□□□□□ -1.77
TRA2B-215ENST00000492417 MAGEB4O15481 346 aaPredicted RBP4.01□□□□□ -1.77
TRA2B-215ENST00000492417 GPANK1O95872 356 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 SCGB1D2O95969 90 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 PRB1P04280 392 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 FAM157BP0CG42 384 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 CRHBPP24387 322 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 EPHA2P29317 976 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 SUMO3P55854 103 aaPredicted RBP4.01□□□□□ -1.77
TRA2B-215ENST00000492417 C21orf58P58505 322 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 VAMP2P63027 116 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 SKP2Q13309 424 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 FHL5Q5TD97 284 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 FOXB2Q5VYV0 432 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 GPR139Q6DWJ6 353 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 HEPHL1Q6MZM0 1159 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 ACSM5Q6NUN0 579 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 SLC22A25Q6T423 547 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 JAGN1Q8N5M9 183 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 ACBD7Q8N6N7 88 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 CELF2-AS1Q8N7Q2 184 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 ACBD4Q8NC06 268 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 RPL3LQ92901 407 aaKnown RBP4.01□□□□□ -1.77
TRA2B-215ENST00000492417 INTS14Q96SY0 518 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 CNN2Q99439 309 aaKnown RBP4.01□□□□□ -1.77
TRA2B-215ENST00000492417 ALG12Q9BV10 488 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 POTEKPQ9BYX7 375 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 DYNLRB1Q9NP97 96 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 RPS10P5Q9NQ39 176 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 DEPPQ9NTK1 212 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 UFSP2Q9NUQ7 469 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 A6NIN4 97 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 SULT1C2O00338 296 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 VAMP5O95183 116 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 BPNT1O95861 308 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 ABHD16AO95870 558 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 MT-ATP6P00846 226 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 MT-ND5P03915 603 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 HCKP08631 526 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 GTF2F2P13984 249 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 EDN3P14138 238 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 RAB3AP20336 220 aa4.01□□□□□ -1.77
TRA2B-215ENST00000492417 ADH6P28332 368 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms